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SCNpilot_expt_1000_bf_scaffold_700_curated_18

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 20392..21759

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Rhizobium sp. CF142 RepID=J2AS34_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 81.8
  • Coverage: 457.0
  • Bit_score: 734
  • Evalue 5.60e-209
Response regulator PleD {ECO:0000313|EMBL:KGD99548.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.7
  • Coverage: 457.0
  • Bit_score: 736
  • Evalue 2.70e-209
pleD; response regulator PleD; K02488 two-component system, cell cycle response regulator similarity KEGG
DB: KEGG
  • Identity: 80.3
  • Coverage: 457.0
  • Bit_score: 728
  • Evalue 9.70e-208

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Taxonomy

Rhizobium sp. YS-1r → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1368
ATGACTGCACGTATCCTGGTCGTGGACGACATTCCCGCCAACGTCAAACTGCTCGAAGCGCGCCTTCTCGCCGAATATTTCGATGTGCTGACCGCTGCCGACGGCAAGACGGCGCTTGAGATCTGCGACCGCACCCAGGTCGACCTCATCCTCCTCGACATCATGATGCCGGGCATGGACGGATTCGAGGTCTGCGAACGTATCAAGGGCAATCCGCGCACCACGCATATTCCGGTCGTGATGGTGACGGCGCTGGACCAGCCGTCCGACCGGGTGAGGGGACTGAAGGCGGGTGCCGACGATTTTCTCACCAAGCCCGTCAACGACCTGCAGTTGATCTCGCGCGTCAAAAGCCTCCTGCGCCTCAAGACGCTGAGCGATGAATTGCGCTTCCGCGCCGAAACAGCCCACACTATCGGCCTGGAGGAAATGCTGAAGACGGACAGCCGGAGCGAGGAGGCGGCGCAGGTGCTGCTGGTCGATGGCCGCGGCAGCTCGCAGGAGCGTATCGTCAAGGCGCTGAAACCGATCGCCGATGTCATGGCGATGTCGGATCCGCAGGCAGCATTGTTCGAGGCAGCGGAAAACCCGTTCGAACTGGTCATCGTCAACTCGAATTTCGACGATTACGATCCGTTGCGCCTGTGCTCGCAGCTCAGGTCGCTGGAGCGGACGCGTTTCATACCGATCCTGCTGATCACCGAGCAGGGCGCCGACAGCATGATCGTGCGGGCGCTGGATCTCGGCGTCAACGACTATATCGTCCGGCCGCTCGATCCGAACGAACTCGTCGCGCGCTGCCTGACCCAGATCCGCCGCAAGCGCTTCAACGACCGCCTGCGCAGCAGCGTCAAGCAGACGATCGAGCTGGCGGTAACCGACGGCCTGACCGGCCTGAACAACAGGCGCTATCTCGACAATCACCTGAAGCTGCTGTTCAGCCGGGCGATCGCCCGCGGCCGGCCGCTGTCCGTCTGCATCACCGATATCGACCGCTTCAAGAGCGTGAACGACACCTATGGCCACGATGCCGGCGACGAGGTGCTGAAGGAGTTTGCCCAACGCATCCGCGGGACAGTGCGCGGCGCCGATCTTGCTTGCCGCTATGGTGGCGAGGAGTTCGTGCTCGTGATGCCGGACACGCCGCCGGAAATGGCTGCGGCCGTGGCCGAGCGGCTGCGCGGTCGTATCGAAGGCGAGCCTTTCAGCCTGCCGGGCGGCGATCTGCTGAAGCTCACGGCCTCGATGGGCATATCCTCGACCACCGGCAGCATGGAAACTCCGGAGCAATTGCTCAAGCAGGCCGACCGGGCGCTCTACGAAGCCAAGAACGGCGGACGCAACCGTGTCGTGGCGGCAGCGGCCTGA
PROTEIN sequence
Length: 456
MTARILVVDDIPANVKLLEARLLAEYFDVLTAADGKTALEICDRTQVDLILLDIMMPGMDGFEVCERIKGNPRTTHIPVVMVTALDQPSDRVRGLKAGADDFLTKPVNDLQLISRVKSLLRLKTLSDELRFRAETAHTIGLEEMLKTDSRSEEAAQVLLVDGRGSSQERIVKALKPIADVMAMSDPQAALFEAAENPFELVIVNSNFDDYDPLRLCSQLRSLERTRFIPILLITEQGADSMIVRALDLGVNDYIVRPLDPNELVARCLTQIRRKRFNDRLRSSVKQTIELAVTDGLTGLNNRRYLDNHLKLLFSRAIARGRPLSVCITDIDRFKSVNDTYGHDAGDEVLKEFAQRIRGTVRGADLACRYGGEEFVLVMPDTPPEMAAAVAERLRGRIEGEPFSLPGGDLLKLTASMGISSTTGSMETPEQLLKQADRALYEAKNGGRNRVVAAAA*