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SCNpilot_expt_1000_bf_scaffold_700_curated_23

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(25200..27557)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.1
  • Coverage: 789.0
  • Bit_score: 1337
  • Evalue 0.0
ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-] similarity KEGG
DB: KEGG
  • Identity: 85.0
  • Coverage: 789.0
  • Bit_score: 1331
  • Evalue 0.0
ribonuclease R n=1 Tax=Rhizobium phaseoli RepID=UPI0002FC4204 similarity UNIREF
DB: UNIREF100
  • Identity: 85.7
  • Coverage: 789.0
  • Bit_score: 1336
  • Evalue 0.0

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Taxonomy

Rhizobium etli → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2358
ATGACGAACAGAGAACCGCGCGGCAAGGCAGCACAGACCGGCAAACGGGCTGGCAGGGCCGCCCGCGCGGAGACTGCCAAAAGCGGCGACAGCATCATTCAGGGCGTGCTGCCGCCGCGGGACGTGATCCTGCGTTTCATCGCCGACCATCCCGAAAAAGCATCCAAACGCGAACTGGCCAAGGCCTTCGGCCTGAAAGGCGAAAGCCGCGTCGAGCTCAAGAACCTGCTGCGTTCGCTCGAAGAAGACGGCCTCGTCCAGAAGAACCGCAAATCCCTGATCCGCCCCGGCGCCCTGCCGCCCGTTACCGTGATCGACATCACCACCCGCGACAAGGACGGCGAACTGATCGGCCGCCCGGCCGAGTGGCCGGAGGACGCCGGTGTCGCACCGGCGGTGCTGATCCGCCAATCCTCCGAAAAGCGCGGCAAGGGCAAGACGCCGGCCGCCGGCCTCGGCGACCGCATCCTGGCGAAGATCTTCCCGGCAAGCGAACGCGGCGGGCCGGCCTATACGGCGCGCATCATCAAGGTCATCGACAAGCGCATGAACGCCGTGCTCGGCGTGTTCCGCGAGACGCCCGGCGGCGGTGGACGGCTGATGCCGATCGAAAAGCGCGGCGAAGAAATGGTCATCGATCCGGATTCGACCGGCGAAGCCAGGGACGGCGATCTCGTCGAGGTCGAAGTGGCACGGCTCGGCCGTTTCGGCCTGCCGCGGGCGAAGGTCCTGACAGTGGTCGGTTCCGTCGCCTCGGAAAAGGCGATCTCGATGATCGCCATCTATGCGCACGGCATCCCCCACATCTTCCCACCGGCCGTCGAGGCCGAGGCAGAAGCCGCCAAGGCCGCGACCATGGCGAGCCGCGAGGACTGGCGCGCGCTGCCGCTGATCACCATCGACCCGGCCGACGCCAAGGACCATGACGACGCCGTCTATGCCGAAGCCGACCCTTCGCCGGACAATGTCGGCGGCGTCATCGTCACGGTGGCGATCGCCGATGTCTCCTGGTACGTCAGGCCGGGCTCGCCGCTCGACCGCGAGGCGCTGAAGCGCGGCAATTCCGTGTATTTCCCCGATCGCGTCGTGCCGATGCTGCCCGAGCGCATCTCCAACGATCTCTGCTCGCTGAAGGAAGGCGTCGACCGGCCGGCACTCGCCGTGCGGATGGCATTTTCTTCCGAAGGCCGCAAGATCGGCCACACCTTCCATCGCATCATGATGAAGAGTGCGGCCAAACTCTCCTACAGCCAGGCCCAGGCGGCCATCGACGGCGCGCCCGACGACAAGACCGGCCCGCTGCTCGAGCCGATCCTGAAGCCGCTGTGGCACGCCTACCACGTGATGAAGCGCGGCCGCGACCGGCGCCAGCCGCTGGAACTCGACATGCCGGAGCGCAAGATCCTGCTCAAGCCCGACGGCACGGTGGACCGCGTCTTCGTGCCGCCACGGCTCGACGCCCACAAGCTGATCGAGGAGATGATGATCCAGGCGAACGTCGCCGCCGCCGAGACGCTGGAGAAGAAGCGCCAGCCGCTGATCTACCGCATCCACGACGCGCCGTCGCTTGCCAAGCAGGAGACGCTGCGGGAGTTCCTGGCGACGCTCGGCATCCCGCTCGCCAAGGGCGGCAATGTGCGCGCCAACTCCTTCAACGGCATCCTCGCCAAGGCGGAAGACACGCCGCACCAGACCATGGTCAACGAGATGGTGCTGCGCTCCCAGAGCCAGGCGATCTACAGCCCCGACAATATCGGCCATTTCGGCCTCAACCTGATGAAGTACGCCCATTTCACCTCGCCGATCCGTCGGTATGCCGACCTGATCGTGCATCGTGCCCTGGTGGGGTCGCTCGGCTTCGGCGAAGGCGGGATCACGCCGGACGAGGAGGCGTCGCTCGACGATATCGCCGCGGAAATCTCGACCTTCGAGCGCCGCGCCATGGCGGCCGAGCGCGAGACGGTCGACCGGCTGATCGCCCATCATCTCGTTGGCCGAATCGGCGAGGAATTTGCCGGCCGCGTTCAGGGCGTCACCAAATCGGGGCTGTTCATCAGCCTGCCGGATTACGGCGCCGACGGCTTCGTGCCGATCTCGACCCTCGGCAACGACTATTTCATCTACGACGAGGCGCACCAGGCGCTGTCGGGCGAGCGCACCGGTCTCGGCTATCGCCTCGGCGACGAGGTGCAAGTGCGACTGGCCGAGGCGGTGCCGCTCGCCGGCGCCCTGCGGTTCGAGATGCTGAGCGAGGGGCGCAAGATGCCGACGGCGGTGCGTTCGTTCCACAAGACATCGCGGCGCGGTGCCGGGCAGCGCAAGCAGCCGGGCACCCGTCCGCCACGCGGTCGCCGCTAA
PROTEIN sequence
Length: 786
MTNREPRGKAAQTGKRAGRAARAETAKSGDSIIQGVLPPRDVILRFIADHPEKASKRELAKAFGLKGESRVELKNLLRSLEEDGLVQKNRKSLIRPGALPPVTVIDITTRDKDGELIGRPAEWPEDAGVAPAVLIRQSSEKRGKGKTPAAGLGDRILAKIFPASERGGPAYTARIIKVIDKRMNAVLGVFRETPGGGGRLMPIEKRGEEMVIDPDSTGEARDGDLVEVEVARLGRFGLPRAKVLTVVGSVASEKAISMIAIYAHGIPHIFPPAVEAEAEAAKAATMASREDWRALPLITIDPADAKDHDDAVYAEADPSPDNVGGVIVTVAIADVSWYVRPGSPLDREALKRGNSVYFPDRVVPMLPERISNDLCSLKEGVDRPALAVRMAFSSEGRKIGHTFHRIMMKSAAKLSYSQAQAAIDGAPDDKTGPLLEPILKPLWHAYHVMKRGRDRRQPLELDMPERKILLKPDGTVDRVFVPPRLDAHKLIEEMMIQANVAAAETLEKKRQPLIYRIHDAPSLAKQETLREFLATLGIPLAKGGNVRANSFNGILAKAEDTPHQTMVNEMVLRSQSQAIYSPDNIGHFGLNLMKYAHFTSPIRRYADLIVHRALVGSLGFGEGGITPDEEASLDDIAAEISTFERRAMAAERETVDRLIAHHLVGRIGEEFAGRVQGVTKSGLFISLPDYGADGFVPISTLGNDYFIYDEAHQALSGERTGLGYRLGDEVQVRLAEAVPLAGALRFEMLSEGRKMPTAVRSFHKTSRRGAGQRKQPGTRPPRGRR*