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SCNpilot_expt_1000_bf_scaffold_700_curated_29

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(33910..34587)

Top 3 Functional Annotations

Value Algorithm Source
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.8
  • Coverage: 225.0
  • Bit_score: 410
  • Evalue 1.70e-111
aspartate carbamoyltransferase (EC:2.1.3.2); K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] similarity KEGG
DB: KEGG
  • Identity: 92.9
  • Coverage: 224.0
  • Bit_score: 406
  • Evalue 7.10e-111
Aspartate carbamoyltransferase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D6H6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 225.0
  • Bit_score: 410
  • Evalue 1.20e-111

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 678
GAAACGCTGATCGATACGGCGATGACGCTGAACGCCATGCATCCGGACGTGCTGGTGGTGCGCCATTCCTCCGCTGGTGCTGCCGCGCTCCTGGCGCAAAAGGTCTCCTGCTCGGTGATCAATGCCGGCGACGGCGCCCACGAGCACCCGACGCAGGCGCTGCTCGATGCGCTCACCATCCGCCGCGCCAAGGGCAAGCTGGCGCGCATCATCGTCGCCATCTGCGGCGACGTGCTGCATTCGCGCGTGGCCCGCTCCAACATCCTGCTGCTCAACGCCATGGGTGCGCGCGTGCGCGTCGTCGGCCCGGCGACGCTTCTGCCGGCCGGCATCGCCGACATGAGCGTCGAGGTCTATCACTCGATGGAGGAAGGCCTGAAGGATGCCGACGTGGTGATGATGCTGCGCCTGCAGCGCGAGCGCATGTCCGGCTCCTTCGTGCCGTCGGTGCGGGAATATTTCCATTATTACGGCCTCGATGCCGAGAAGTTGAAATATGCCAAGGAAGACGCGCTGGTGATGCATCCCGGGCCGATGAACCGCGGCGTCGAGATCGCCTCCGAGATCGCCGACGGGCCGCAGAGCGTCATCGAGCAACAGGTGGAAATGGGCGTCGCCGTGCGCATGGCCGTCATGGAAGCCCTGCTGCTGTCGCAGAACAACGGAGAACGGGCATGA
PROTEIN sequence
Length: 226
ETLIDTAMTLNAMHPDVLVVRHSSAGAAALLAQKVSCSVINAGDGAHEHPTQALLDALTIRRAKGKLARIIVAICGDVLHSRVARSNILLLNAMGARVRVVGPATLLPAGIADMSVEVYHSMEEGLKDADVVMMLRLQRERMSGSFVPSVREYFHYYGLDAEKLKYAKEDALVMHPGPMNRGVEIASEIADGPQSVIEQQVEMGVAVRMAVMEALLLSQNNGERA*