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SCNpilot_expt_1000_bf_scaffold_1759_curated_11

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(9896..11131)

Top 3 Functional Annotations

Value Algorithm Source
Putative replication protein C n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CIK4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 56.9
  • Coverage: 408.0
  • Bit_score: 442
  • Evalue 4.00e-121
Uncharacterized protein {ECO:0000313|EMBL:KGE02341.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.5
  • Coverage: 400.0
  • Bit_score: 474
  • Evalue 1.70e-130
repC; replication initiation protein RepC similarity KEGG
DB: KEGG
  • Identity: 52.1
  • Coverage: 411.0
  • Bit_score: 395
  • Evalue 1.80e-107

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Taxonomy

Rhizobium sp. YS-1r → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1236
ATGGAAAGATTAGCGACGACGCCTTTTGGCGGCGCACGCATGCGTGCGGACATATTTAGCCTGCAGGCCGCTATCGCCCGGCGGCAGCAGGTTTTGAAAAAGGGCGAGGGTAATGACGAGAGCGGCAGTGCCGACAAATGGCTGCTGTTGCGGGCCCTGACCGAGGCGCGGGACGCCTACGGCCTATCCGACAGGACGCTTTGCGTGCTGGAAGCTTTGACGAGCTTCCACGGCGAACGTGTTCTCGACGGCCGCAACCCGATCATCGTCTTTCCCTCGAACACCGAATTGTCGTTGCGCGCCCGCGGCATGTCCCCGGCAACCTTGCGCCGGCATCTCGCCCTGCTGGTCGAGGCCGGCCTGATCATGCGTCGCGACAGCGCCAACGGCAAACGCTTCTGCCGCCGTGACGACAATGGTGCTGTCGAAAGCGCCTTCGGTTTCGACCTCGCCCCCCTCGCGCTGCTTGCGGGTGAAATCCACGCCCATGCGGACATCGCCCGTGCCCGTGCCAAGGCCGTGCAGGCCCTGCGCATGGAAATCACCCTGCACCTGCGCGACATCGCCAAAACCATCCAGGCCGCCCACATGGAGCAGCGTTCCGGCCCCTGGACGGATTTCACCGAACAGCTGGCCGCCCTTTCCGGCCGGATCTCCCGCTCAGCGGACATGGACGGCCTCCATCTGCGCCGCGATGCCCTGCTTCTGCTGCGCAACAGCGTAGAAAAGACCTATCTCGAAAGCCTCAGCGAACAAGAAATGAGCGCCAATGAATCCGATTTTGAGCGGCATATTCAAGATTCAAATATAGAATATAAATCTGAATCGATCGCTCCGGAAAAATCGACAGCCAAAATTGTGCCAGATCAACGGCAGGCCTTAACCGAGCCGAGAGAAATGCAGCTTTCCCTCAAGCAGTTCCTGCAGGCCTGCCCCGATCTGTCGGCTTATAACCGCGATGCCATCCGCAGTTGGAACGATGTCGCCCACACTGCCGACTTCGTCCGCGGCATGCTGGGGATCTCGCCGGAGGCATGGGGGAAAGCTCGCCGCGCGATGGGCGATCTCGGGGCCGCGGTCACCGTTGCCGCAATCCTCCAGCGCGGCACCGATATCCGCTCTCCCGGTGGATATCTGCGGAATTTGACCGGAAAGGCCGAAGCCGGCCGCTTCTCGGTCTATCCGATGATCAGGGCGCTTGGCAGTGATCGGCAGAGGGGAAATATTTTGCAGTAA
PROTEIN sequence
Length: 412
MERLATTPFGGARMRADIFSLQAAIARRQQVLKKGEGNDESGSADKWLLLRALTEARDAYGLSDRTLCVLEALTSFHGERVLDGRNPIIVFPSNTELSLRARGMSPATLRRHLALLVEAGLIMRRDSANGKRFCRRDDNGAVESAFGFDLAPLALLAGEIHAHADIARARAKAVQALRMEITLHLRDIAKTIQAAHMEQRSGPWTDFTEQLAALSGRISRSADMDGLHLRRDALLLLRNSVEKTYLESLSEQEMSANESDFERHIQDSNIEYKSESIAPEKSTAKIVPDQRQALTEPREMQLSLKQFLQACPDLSAYNRDAIRSWNDVAHTADFVRGMLGISPEAWGKARRAMGDLGAAVTVAAILQRGTDIRSPGGYLRNLTGKAEAGRFSVYPMIRALGSDRQRGNILQ*