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SCNpilot_expt_1000_bf_scaffold_2733_curated_9

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 7813..8328

Top 3 Functional Annotations

Value Algorithm Source
def; peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88] similarity KEGG
DB: KEGG
  • Identity: 85.4
  • Coverage: 171.0
  • Bit_score: 300
  • Evalue 3.20e-79
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli CNPAF512.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.4
  • Coverage: 171.0
  • Bit_score: 300
  • Evalue 1.10e-78
peptide deformylase n=1 Tax=Rhizobium phaseoli RepID=UPI0003038F89 similarity UNIREF
DB: UNIREF100
  • Identity: 85.4
  • Coverage: 171.0
  • Bit_score: 301
  • Evalue 4.60e-79

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Taxonomy

Rhizobium etli → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 516
ATGACGATCAAGCCCCTCATCATCCTGCCCGATCCCCTTCTCCGACAGGTTTCCGCGCCGGTGGAGCGCGTCGATGCCGAACTGACGCAGCTTGCGGACGACATGCTGGAAACCATGTACGATGCGCCAGGCATCGGTCTTGCCGCCATCCAGATCGGCGTGCCGCGGCGCCTGCTGGTGATCGACCTTGCCAAGGAAGGCGAGGACAAGCAGCCGCAGGTCTTCATCAATCCGCAGATCCTGTCCTCCTCCGATGTGCGTTCGGTCTATGAGGAAGGCTGCCTTTCCATTCCTGATTATTATGCGGAGGTGGAGCGTCCGGCGGAGATCGAGGTCCAATATCTCGACCGTGACGGCAAGGAGAAGACCGTCAAGGCCGACGGCCTGCTCGCCACCTGCCTGCAGCACGAGATCGATCATCTCAACGGCGTGCTGTTCATCGACCATATCTCGCGGCTGAAGCGGGAAATGGTGGTGAAGAAGTTCACCAAGGCCGCCAAGGGCAAGGCCGTCTGA
PROTEIN sequence
Length: 172
MTIKPLIILPDPLLRQVSAPVERVDAELTQLADDMLETMYDAPGIGLAAIQIGVPRRLLVIDLAKEGEDKQPQVFINPQILSSSDVRSVYEEGCLSIPDYYAEVERPAEIEVQYLDRDGKEKTVKADGLLATCLQHEIDHLNGVLFIDHISRLKREMVVKKFTKAAKGKAV*