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SCNpilot_expt_1000_bf_scaffold_3605_curated_20

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 19913..20887

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhodococcus sp. 29MFTsu3.1 RepID=UPI0003788797 similarity UNIREF
DB: UNIREF100
  • Identity: 43.8
  • Coverage: 324.0
  • Bit_score: 282
  • Evalue 7.10e-73
Ribose transport system permease protein rbsC {ECO:0000313|EMBL:AHK34257.1}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.5
  • Coverage: 314.0
  • Bit_score: 277
  • Evalue 3.20e-71
monosaccharide ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 34.3
  • Coverage: 309.0
  • Bit_score: 196
  • Evalue 1.20e-47

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Taxonomy

Rhodococcus opacus → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 975
ATGAAAATGACAGCGGAAACCAGAAGCAACCTTGCCCGCATCGCCCTGATGCTCGGCGTCTACCTGATCTTCGCCAGCCGCATCCCGAGCTATTATTCGACGGCGGGCGTTGCCGCGCTGCTCGACGGTGCGGTTCTCGCCGGCATTATCGCCATCGGCGTCGGCCTGACCATGATCGCCGGTGAGATGGACCTGTCAGTGGGATCGATGGCCGCTTTTGCCGGCATCCTGTCGATAAAATTCTACGCCTTCGGCATGCTGCCGGCCTTCCTGCTGGTCATCCTGGTCTGTGCGGTCATCGGCGCGATCCAGGGTTATTGCATCTACCGGCTCAACATCAGTTCCATGGTCTTCACCATCGGCACGCTGATTGCGCTGCGCGGCCTGACGCTGGTGATCTCGCAGGAAAAGACGGCGCTCATCCCCTTCGAGGACATCGCCCAGACCGATATCCTGTCGACGAAATTCTTCATCTTCTCGATCCCCTCCGTCATCCTGCTGCTCCTGGTGCTGCTGGTGGATTTCCTGTCGCGGCGGACACTCTGGGGCCGCGAAGTCTTCGCTATCGGCGGCGGGCGCAGCGAGGCGCGCGCCGCCGGCGTTTCGATGAAGCGGCCGATCGTGCTGATCTTCTCGCTGTCGGCGGCGCTCGCCGGCCTCGCTGGCGCGCTCTTGTCGATCAAGTCGGGCAGCGCCAGCCCGCTCGGCTTCGAAGCCGTCGTCCTCGAGGCGGTGACGGCCTGCCTGATCGGCGGCATCGCGCTCTCCGGCGGTCGCGGCAGCATTCCGGGCATTCTCATCGGCCTTTTCACCATCCGTTTCCTGGTCAGCGGCATTGCCGCGCTCGGCGCGCCGTTCTGGATGCAGAGCCTGGCAACCGGCGCCCTGCTGATCTTCGTCATCATCGGCGAGGCGGTGATCCGCCATGTCGTGCGCCGCCGGAAGTTTGCGCTTTCGGCGCAGCCTGCAGCGTGA
PROTEIN sequence
Length: 325
MKMTAETRSNLARIALMLGVYLIFASRIPSYYSTAGVAALLDGAVLAGIIAIGVGLTMIAGEMDLSVGSMAAFAGILSIKFYAFGMLPAFLLVILVCAVIGAIQGYCIYRLNISSMVFTIGTLIALRGLTLVISQEKTALIPFEDIAQTDILSTKFFIFSIPSVILLLLVLLVDFLSRRTLWGREVFAIGGGRSEARAAGVSMKRPIVLIFSLSAALAGLAGALLSIKSGSASPLGFEAVVLEAVTACLIGGIALSGGRGSIPGILIGLFTIRFLVSGIAALGAPFWMQSLATGALLIFVIIGEAVIRHVVRRRKFALSAQPAA*