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SCNpilot_expt_1000_bf_scaffold_3605_curated_22

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(21837..22760)

Top 3 Functional Annotations

Value Algorithm Source
HTH-type transcriptional regulator pcaQ Pca operon transcriptional activator n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AET8_RHIFH similarity UNIREF
DB: UNIREF100
  • Identity: 63.0
  • Coverage: 297.0
  • Bit_score: 375
  • Evalue 5.80e-101
pcaQ; HTH-type transcriptional regulator pcaQ Pca operon transcriptional activator; K02623 LysR family transcriptional regulator, pca operon transcriptional activator similarity KEGG
DB: KEGG
  • Identity: 63.0
  • Coverage: 297.0
  • Bit_score: 375
  • Evalue 1.80e-101
LysR family transcriptional regulator PcaQ {ECO:0000313|EMBL:CCE99570.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.0
  • Coverage: 297.0
  • Bit_score: 375
  • Evalue 8.20e-101

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Taxonomy

Sinorhizobium fredii → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 924
TTGGACAGCCGGATCAAGTTTCGACACCTCTACACCTTTGTGGAAGTCGCGCGGCAGAAAAGCGTCGGCCGCGCCGCCGACGTGTTGTCCCTCACCCAGCCGGCGGTGACCCGGACGATCCGTGAACTGGAGGATTATCTTGGCGTCGATCTGTTCGAAAGGGAAGGTCGCGGCATCGTCATAACACGGTTTGGCGAGGTGTTCCTGCGCCATGCCGGCGAGAGCATCGCCGCGGTTCGCCGCGGCGTCGATTCCATTTCCCGGGCGAAAACCTCCTCCGGCCCGCCGCTGCGGATCGGCGCCCTGCCGACGGCGTCCGCGAGCTTCCTTCCGGATGCGGTGGCGGACTTCATCAAGGCGGGCACGGGCAGCGTGGTCACCATCGTTACCGGCGAAAACCGCTGGCTTCTCGACGCCTTGCGGGTGGGCGAACTCGATCTCGTCGTCGGCCGTCTTGCTGCAGCCGAATTCATGGCCGGCCTGACCTTCGATCCGCTCTATTCGGAAGAGGTCGGCTTTGCCGTCCGCGCCGGCCATCCGCTGTTGCAGCGCCGCAGCTTCTCGCTGGCCGAGATCGCACATTACACGGTGCTGATGCCGATCAGGGGATCGGTGATCCGGCCGTTCGTCGATCGTTTCCTGTTGTCCAACGGCATCGGTGAGTTGGCGAACACGATCGAAACCGTCTCCGACAGTTTCGGCCGCGCCTTCCTGCAGACGCAGGATGCCGTCTGGATCATTTCGAAAGGCGTGGTGAAACGCGAGATCGAGGCCGGGACCATGGCCTTTCTCGACGTCGATACGTCGGAGACACGGGGCGCCGTCGGTTTCACCATGCGGGCCGACGTCGCGCCCACCCTGCCGGTGTCGATCATGATCACGACGATCCGCGCCCGCCTCGCCGGCAGAGGCCGACAATTCTAG
PROTEIN sequence
Length: 308
LDSRIKFRHLYTFVEVARQKSVGRAADVLSLTQPAVTRTIRELEDYLGVDLFEREGRGIVITRFGEVFLRHAGESIAAVRRGVDSISRAKTSSGPPLRIGALPTASASFLPDAVADFIKAGTGSVVTIVTGENRWLLDALRVGELDLVVGRLAAAEFMAGLTFDPLYSEEVGFAVRAGHPLLQRRSFSLAEIAHYTVLMPIRGSVIRPFVDRFLLSNGIGELANTIETVSDSFGRAFLQTQDAVWIISKGVVKREIEAGTMAFLDVDTSETRGAVGFTMRADVAPTLPVSIMITTIRARLAGRGRQF*