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SCNpilot_expt_1000_bf_scaffold_1530_curated_20

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(18632..19297)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulatory protein QseB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ER76_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 76.8
  • Coverage: 220.0
  • Bit_score: 350
  • Evalue 1.40e-93
Transcriptional regulatory protein QseB {ECO:0000313|EMBL:EYR77359.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.8
  • Coverage: 220.0
  • Bit_score: 350
  • Evalue 2.00e-93
DNA-binding response regulator in two-component regulatory system similarity KEGG
DB: KEGG
  • Identity: 67.9
  • Coverage: 218.0
  • Bit_score: 311
  • Evalue 2.30e-82

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 666
TTGCGAGTCCTGGTCGTTGAAGATGACGAACGTATCAGCGAAGATATCAGCACCGTTCTGACCTCCTCCGGCTATGCCGTGGACGGTGCGCGCGATGGCGAAACGGCGTGGTTCAAGGGTGACACGGAAGAATATGCGCTCGTCGTGCTCGACCTCGGCCTGCCCAAACTGGACGGCATATCCATCCTCAAGCGATGGCGCGCCAACGGCCGGCACATGCCGGTTCTTGTCCTGACCGCACGTGGCAGTTGGGCGGAGCGCGTCGAGGGCATCGACGCCGGGGCGGACGACTACCTTCCGAAGCCCTTTCAGTTCGAAGAGCTTCTCGCCAGGGTCAGGGCCCTCATTCGCCGCTCCGTCGGCCACGGCGCGGCGACGATCGAAATCGGCGATCTGACGATCGATACGCGCAGCATGCGCGTCAGTCTCGGCGGCTTGCCGCAATCCCTGACACCATTCGAGTATCGCCTCGTTTCGTATCTCGCGCATCATCGCGACCGTGTCGTGTCGGCGAGCGAGCTGCTGGACCACGTTTACGGTGACGACTTCTCGAGGGAGGCAAACGCGCTCGAGGCGCTGATCACGCGGCTTCGGAAGAAACTGGGAGCCTCCGTCATCACCACCCGCCGCGGGTTCGGCTACAGCATGCCCGACGAGGCGAAATGA
PROTEIN sequence
Length: 222
LRVLVVEDDERISEDISTVLTSSGYAVDGARDGETAWFKGDTEEYALVVLDLGLPKLDGISILKRWRANGRHMPVLVLTARGSWAERVEGIDAGADDYLPKPFQFEELLARVRALIRRSVGHGAATIEIGDLTIDTRSMRVSLGGLPQSLTPFEYRLVSYLAHHRDRVVSASELLDHVYGDDFSREANALEALITRLRKKLGASVITTRRGFGYSMPDEAK*