ggKbase home page

SCNpilot_expt_1000_bf_scaffold_6019_curated_8

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(5437..6054)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 n=1 Tax=Rhizobium mongolense RepID=UPI0003B67457 similarity UNIREF
DB: UNIREF100
  • Identity: 94.6
  • Coverage: 205.0
  • Bit_score: 400
  • Evalue 1.10e-108
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.1
  • Coverage: 205.0
  • Bit_score: 399
  • Evalue 2.10e-108
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 92.7
  • Coverage: 205.0
  • Bit_score: 394
  • Evalue 1.50e-107

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. YS-1r → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 618
ATGAGCAAGCGCGAATCGTCCAAGTACAAAATCGACCGCCGCATGGGCGAAAACATCTGGGGCCGCCCGAAGTCCCCAGTCAACCGTCGCGAATACGGCCCGGGCCAGCACGGCCAGCGCCGCAAGGGCAAGCTCTCCGACTTCGGCGTGCAGCTGCGCGCCAAGCAGAAGCTGAAGGGCTACTACGGCGACATCCGCGAGAAGCAGTTCCGCGCCACCTACGACGAAGCCAACCGCCGCAAGGGTGACACCTCGGAAAACCTGATCGGCCTGCTCGAGTCGCGTCTGGACGCGATCGTCTACCGCGCCAAGTTCGTTCCGACGGTCTTCGCTGCTCGTCAGTTCGTCAACCATGGCCACGTCACCGTCAACGGCGTTCGCGTCAACATCGGTTCCTACCGTTGCAAGGTCGGCGACGTCATCGAAGTTCGCCAGAAGTCCAAGCAGCTGGTTTCGGTTCTCGAAGCCGTCGGCCTGACCGAGCGTGACGTTCCGGATTACGTCGAAGTCGACCACAACAAGATGGTTGCGACCTTCGCCCGCGTTCCGACCCTGTCCGACGTTCCGTATCCGGTCGTCATGGAACCGCATCTGGTCGTCGAATTCTATTCGCGTTAA
PROTEIN sequence
Length: 206
MSKRESSKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKGYYGDIREKQFRATYDEANRRKGDTSENLIGLLESRLDAIVYRAKFVPTVFAARQFVNHGHVTVNGVRVNIGSYRCKVGDVIEVRQKSKQLVSVLEAVGLTERDVPDYVEVDHNKMVATFARVPTLSDVPYPVVMEPHLVVEFYSR*