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SCNpilot_expt_1000_bf_scaffold_2820_curated_7

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(7710..9446)

Top 3 Functional Annotations

Value Algorithm Source
spermidine/putrescine ABC transporter permease n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000376D6A8 similarity UNIREF
DB: UNIREF100
  • Identity: 93.0
  • Coverage: 271.0
  • Bit_score: 503
  • Evalue 3.50e-139
Inner membrane ABC transporter permease protein {ECO:0000313|EMBL:CDM59336.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 271.0
  • Bit_score: 503
  • Evalue 3.70e-139
spermidine/putrescine ABC transporter; K02053 putative spermidine/putrescine transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 91.9
  • Coverage: 271.0
  • Bit_score: 495
  • Evalue 2.30e-137

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Taxonomy

Rhizobium sp. LPU83 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1737
ATGACCAGCGCGGCCACAACCTCCATCCTGCCCGGCCGCGGCGGCTTTTTCGGCGTCTTGTCGGATGCCTTCTGGCGCCGGCCGAAACTTCTCCTGTTCCTGATGCTGACGCCGCCGCTGCTCTGGCTCGGCATCATCTATATCGGCTCGCTGCTGGCGCTGTTGCTGCAGAGCTTCTTTTCGGTCGACGAGTTTTCCGGGCTGATCAATTACGAATTCACGCTGGCCACCTATGCCGAACTGTTGCGGCCGGCGAATTTCGACATCATCCTGCGCACGGTGATCATGGCCGCGGCCGTCACGCTGTTTTCCGCCGCCATCGGCTTCCCGATCGCCTATTATGCGGCGCGTTACGCCAAGGGCAAATGGAAGGCGATCTTCTATCTCGGCATCATGCTGCCCTTGTGGTCGAGCTATCTCGTCAAGATCTATGCCTGGAAGCTGATCCTCGCCAAGGAGGGCATCCTCACCTGGATCTTCGCCAAGCTGCATCTGCTCTGGCTGCTGGAGGGTGTCCTCGCCCTGCCTGTCATCGGCGGCAATTCGCTGTCGATCAGCTACATCGGCACCTTCCTCGTCTTCGTCTATATCTGGCTGCCCTACATGATCCTGCCCACCCAGGCGGCGCTGGAGCGCGTGCCCGGCAACCTGCTGGAGGCCTCGTCGGATCTCGGCGCCACGCCGCGCCAGACGTTCCGCACCGTGCTCCTGCCGCTGGCGCTGCCCGGCATCATCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCAGGCTGTTCATCGGCCAGGCTGTCTACAGCCAGCAGGGCACGGCCGGCAACGTGCCGCTCGCCGCCGCCTTCTCGGTGGTTCCGATCGTCATCATGGCCATCTATCTCTGGATCGCCAAACGCCAGGGAGCTTTCGATGCGCTCTGATCGCGGCCACCGCGCCCCGCTTGTCCTGAAAATCGCCGCCGGCGCCGGATTGCTGTTCCTGCACCTGCCGATCCTCCTGATCTTCGTCTACGCCTTCACCACCGAAGAAAAGTCCTACCAGTGGCCGCCGCCGGGCTTTACCACGCAATGGTTCGCGGTCACCTGGAACCGGCCGGATGTCTGGCAGGCGCTCGGTCTCTCGGTGCAGGTCGCGACGATCGCTACCGCCATCGCGCTGCTGCTCGGCACGCTGTGTGCCGCCGCCGTCAGCCAGACGAAGTTTTTCGGCCGGGAGGCGATCTCGCTGCTGGTCATCCTGCCGATCGCGCTGCCCGGCATCATCACCGGCATCGCGTTGCGCTCCGCCTTCAGCCTGTTCGACATCCCGTTTTCCGTCTGGACCATCATCCTTGGCCACGCCACCTTCTGTGTCGTCGTGGTCGACAACAATGCGGTTGCCCTCTTCCGCCGCACCTCGGGTTCGCTGATCGAGGCCTCTATGGATCTTGGTGCCGACGGTTTCCAGACCTTCCGCCATGTGGTGTTGCCGAACATCGGCACGGCGCTTCTGGCCGGCGGCATGCTCGCCTTCGCGCTGTCCTTCGACGAGGTCATCGTCACCACCTTTACCGGCGGCCAGCAATCGACGCTGCCGATCTGGATGCTGGAGGAACTGATCCGGCCGCGTCAGCGCCCGGTTACCAATGTCGTCGCCATGGTTGTCGTGCTCGTCACCTTCCTGCCGATCCTGGCGGCCTATTACCTCACCCGCGACGGCGACCAGGTCGCCGGCAGCGGCAAGTAA
PROTEIN sequence
Length: 579
MTSAATTSILPGRGGFFGVLSDAFWRRPKLLLFLMLTPPLLWLGIIYIGSLLALLLQSFFSVDEFSGLINYEFTLATYAELLRPANFDIILRTVIMAAAVTLFSAAIGFPIAYYAARYAKGKWKAIFYLGIMLPLWSSYLVKIYAWKLILAKEGILTWIFAKLHLLWLLEGVLALPVIGGNSLSISYIGTFLVFVYIWLPYMILPTQAALERVPGNLLEASSDLGATPRQTFRTVLLPLALPGIIXXXXXXXXXXXXXXXXPGCSSARLSTASRARPATCRSPPPSRWFRSSSWPSISGSPNARELSMRSDRGHRAPLVLKIAAGAGLLFLHLPILLIFVYAFTTEEKSYQWPPPGFTTQWFAVTWNRPDVWQALGLSVQVATIATAIALLLGTLCAAAVSQTKFFGREAISLLVILPIALPGIITGIALRSAFSLFDIPFSVWTIILGHATFCVVVVDNNAVALFRRTSGSLIEASMDLGADGFQTFRHVVLPNIGTALLAGGMLAFALSFDEVIVTTFTGGQQSTLPIWMLEELIRPRQRPVTNVVAMVVVLVTFLPILAAYYLTRDGDQVAGSGK*