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SCNpilot_expt_1000_bf_scaffold_2820_curated_14

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(14235..15131)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Rhizobium giardinii RepID=UPI00035CA107 similarity UNIREF
DB: UNIREF100
  • Identity: 80.7
  • Coverage: 280.0
  • Bit_score: 457
  • Evalue 8.70e-126
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 76.8
  • Coverage: 280.0
  • Bit_score: 435
  • Evalue 1.50e-119
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACI56576.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.8
  • Coverage: 280.0
  • Bit_score: 435
  • Evalue 6.50e-119

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Taxonomy

Rhizobium leguminosarum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 897
ATGAGGCTTCACGGAAATACGCGTCAAAAAATGCAGATCGAACTCATCGAAACCTTCCTCGACCTCATGGAAACCCGCAGTTTCAACCGCACGGCCGAGCGGATGAACCTGACGCAATCGACCGTTTCCCATCGCATCAAGGCGCTGGAATCCTCCTTCGACCGCAAGCTCTTCACCCGAAACAAGGGCGGAACGGTGCCGACGGCTTCCGGCCTGCGTTTCCTCGACCATGCCAAGGCTCTCCAGCGCCAGTGGCACGAGGCGGCGCGGGCGGTGGAAAGCGCCGGCACCTATGAGCGCTCCATGCGCATCGGCGTGCAGCACGACGTCGCCGAAAGCCTGGCGGGGCACTGGATGCAGGCGATCCGCCGGGACCTGCCGGCCACCTCCATCTATATGGAGGCGGATTATTCCATCCAGATGAACCGGGATCTCGCCGCTGGCGACCTCGACCTCGCCATCCTCTATACCCCGCAATACCTGCCGGACCTACATTACGAACGCATCGGCGAGATGACCTATCTGCTGGTCGCCACCGATGCGCAAAGCGTCGCCGATCTCAAGGCCGAGACCTATATCCAGGCGGTCTATTCCCCGGCCTTCGACCGGGCGCACCGGCTGGCGCTGCCGCATCTTTCGGCGCCGCCGCTTGCTTCCGGCCAGAACATCGCCATCACCGGCCTCTTGCGGACGCTGGGTGGCGCGGCCTATGTGACGGCCGCAACGGCGTCCGCCCTGATTGCGGAAAACGCGGCGCGGCCGATCGCGGATGCGCCGCCGATCGCCCAGACGGTCTATGCCGCAACCAGCGTCCGCACCCGCCACGCCCACCAGCACCGCCGTATCATCGGCGTGATGGCGGAGCTTCTGGAGCGTGATGCTTTTCCTTTGAAATGA
PROTEIN sequence
Length: 299
MRLHGNTRQKMQIELIETFLDLMETRSFNRTAERMNLTQSTVSHRIKALESSFDRKLFTRNKGGTVPTASGLRFLDHAKALQRQWHEAARAVESAGTYERSMRIGVQHDVAESLAGHWMQAIRRDLPATSIYMEADYSIQMNRDLAAGDLDLAILYTPQYLPDLHYERIGEMTYLLVATDAQSVADLKAETYIQAVYSPAFDRAHRLALPHLSAPPLASGQNIAITGLLRTLGGAAYVTAATASALIAENAARPIADAPPIAQTVYAATSVRTRHAHQHRRIIGVMAELLERDAFPLK*