ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1236_curated_18

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 13545..14963

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI0003758372 similarity UNIREF
DB: UNIREF100
  • Identity: 68.2
  • Coverage: 472.0
  • Bit_score: 686
  • Evalue 2.40e-194
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 68.2
  • Coverage: 472.0
  • Bit_score: 682
  • Evalue 1.10e-193
Putative transcriptional regulator, GntR family {ECO:0000313|EMBL:ACP25389.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.2
  • Coverage: 472.0
  • Bit_score: 682
  • Evalue 4.80e-193

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sinorhizobium fredii → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1419
ATGACAAATTGGCTTCCCGACCTTTCCACCGGCACCGGCCCGCTTTATGTGCGCCTCGCCGACAGCATCGAATCGGCGATTTCGGAAGGGACATTGTCACCCGGGACAAAATTGCCGCCGCAGCGCAACCTCGCCTATGATATCGGTGTCACCATCGGCACGATCGGGCGCGCCTATTCGCTGGTGCATGAGCGCGGCCTCGTCAGCGGCGAGGTCGGGCGCGGCACCTACGTGCTGCCACCGCCGCAGAACCAGAACTCGGCGCAACCCGATCCCGTCACGGCGTCGATGACGGGGACGCGGCCGCTCGATGCGCCGCCGGGCGTGGTGCGGTTCGATTCGACGGCGGCGCCGGATGTCGGACAGGGCGACACCATCGCCAGCAATCTGGCCGATATCGCGCGCGACCACGGGCTCGACATCACCAGCTACACCCGCACCTTCCCGGCACACTGGTTCCAGGCCGGCGCCAACTGGCTGGCGAAAGGCAACTGGCGCCCTGCCCCGGACAGCATCGTGCCGGCACTGGGTGCCCATGCGGCGATCATGGCGATCATCTCCGCCGTCACGGCGCCGGGCGACAAGATCGTCTTCGAACACCTCACCTATTCGCGGATCAGCCGCAGTGCCGGGCTGATCGGCAGGCGGACCGCCCTGGTGGAGTCCGACGACCAGGGTGTCATCCCGGCCGATTTCGAGCGCCTCTGCGCCCAGCAACACCCAAAACTCGCTTTCCTGATGCCGACGGCGCACAATCCGACCGGCATCTGCATGCCGGCGGATCGCCGCCGGGCCATCGGCGAAATCGCCCGCAAGCACAATGTCTGGCTGGTGGAGGACGATCTCTACGGCGCGATGAGCACCGATACGACACCGCTTTTAACGGAGTTCGCGCCGGAACGGACTTTCCTCGTCGGGGGATTTTCGAAATCCGTGGCCGCCGGCGTGCGCGGCGGCTGGGTCGCCTGCCCGGCGCATTTCAGCCACCGTGTCAGCATCGCCCACAAGATGGTGACCGGCGGCATGCCCTTCCTGCTTGCCGAACTCTGTGCCCGCATGGTGCTTTCGGGAGAAGCCGCGGAGATTCGCGCAAAAACCATCGCCGAACTTAGCAAACGGGTGGATTATGCCCGCAAAACCTTCGCCGGTTTCGAATTTTCCGCAGCAGCAGGCATTCCCTTCCTGTGGCTGAAGCTTCCCGATCCGTGGCTTTCCGGCATCTTCAAGAACGCGGCCTTCCGCGAGGGCGTGCTGGTCGATGACGAGGACGAATTCAAGGCTGGCCGCTCCGACAAGACCTTCCACCGCGTTCGAATCGGCTTTTCGACGCAGGCCTCGGCGCAAGAGGCCGACAAGGGATTCCAGATCGTCCGCCGCCTCCTGGAAACAGGATCGGCAGGTTACGACAGTTATTCATGA
PROTEIN sequence
Length: 473
MTNWLPDLSTGTGPLYVRLADSIESAISEGTLSPGTKLPPQRNLAYDIGVTIGTIGRAYSLVHERGLVSGEVGRGTYVLPPPQNQNSAQPDPVTASMTGTRPLDAPPGVVRFDSTAAPDVGQGDTIASNLADIARDHGLDITSYTRTFPAHWFQAGANWLAKGNWRPAPDSIVPALGAHAAIMAIISAVTAPGDKIVFEHLTYSRISRSAGLIGRRTALVESDDQGVIPADFERLCAQQHPKLAFLMPTAHNPTGICMPADRRRAIGEIARKHNVWLVEDDLYGAMSTDTTPLLTEFAPERTFLVGGFSKSVAAGVRGGWVACPAHFSHRVSIAHKMVTGGMPFLLAELCARMVLSGEAAEIRAKTIAELSKRVDYARKTFAGFEFSAAAGIPFLWLKLPDPWLSGIFKNAAFREGVLVDDEDEFKAGRSDKTFHRVRIGFSTQASAQEADKGFQIVRRLLETGSAGYDSYS*