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SCNpilot_expt_1000_bf_scaffold_3127_curated_17

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 18877..19488

Top 3 Functional Annotations

Value Algorithm Source
Sco copper chaperone family protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI0003728A03 similarity UNIREF
DB: UNIREF100
  • Identity: 70.3
  • Coverage: 128.0
  • Bit_score: 204
  • Evalue 1.20e-49
Electron transport protein SCO1/SenC {ECO:0000313|EMBL:EYR77772.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.8
  • Coverage: 128.0
  • Bit_score: 201
  • Evalue 8.20e-49
senC; putative cytochrome C oxidase assembly factor; K07152 similarity KEGG
DB: KEGG
  • Identity: 66.4
  • Coverage: 128.0
  • Bit_score: 190
  • Evalue 4.20e-46

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 612
ATGCTGTCGAAGGGGGTCGGAATGTCCGTCAAGCGTTTCCGTATCATGATTTGGGTCGCCATCGTCATCGTCGCCGGCGTGCTCGGCTGGCTGACGCTGGAAATGACCAGAACGCGCCAGGACATCGCTGCCGNNNNNNNNNNNNNNNNNNNNNNNCTCGTCGCCCAGGACGGCAAGCCGATCACCGAGCAGGCGTTTCGCGGCAAGCCTTCGGCGGTGTTCTTCGGCTTCACCCATTGCCCCGAGGTCTGCCCGACCACGCTTTTCGAACTCGACGGCTGGCTCGCCAAGGTCGATCCCGACGGCAAAAAGCTGAACGCCTATTTCATCACCGTCGATCCCGAACGCGATACGCCGGAGATTATCGGCGAGTATGTCTCCAACGTTTCCAAGCGCATCGTCGGCATTTCNNNNNNNNCCGCGTCTACGCCAAGAAGGTTCCGCTCGACGAGAAGGATCCGAACGGCGACTATACGATGGACCATACGGCCTCGGTCTTCCTGCTCGATGGCGCCGGGCGCTTCGCCGGCACCATCGCCTATGAGGAAAACCCGGAAACCGCAGTCCAGAAGCTGGAAAACCTGGCGAAGAAGGGCTGATTCGCGCTTTTGA
PROTEIN sequence
Length: 204
MLSKGVGMSVKRFRIMIWVAIVIVAGVLGWLTLEMTRTRQDIAAXXXXXXXXLVAQDGKPITEQAFRGKPSAVFFGFTHCPEVCPTTLFELDGWLAKVDPDGKKLNAYFITVDPERDTPEIIGEYVSNVSKRIVGIXXXXASTPRRFRSTRRIRTATIRWTIRPRSSCSMAPGASPAPSPMRKTRKPQSRSWKTWRRRADSRF*