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SCNpilot_expt_1000_bf_scaffold_1934_curated_15

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(14754..15719)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B0V2_PARDP similarity UNIREF
DB: UNIREF100
  • Identity: 66.9
  • Coverage: 320.0
  • Bit_score: 456
  • Evalue 2.70e-125
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 66.9
  • Coverage: 320.0
  • Bit_score: 456
  • Evalue 8.60e-126
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABL69146.1}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus denitrificans (strain Pd 1222).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.9
  • Coverage: 320.0
  • Bit_score: 456
  • Evalue 3.80e-125

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Taxonomy

Paracoccus denitrificans → Paracoccus → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 966
ATGAAAAGAACCGGACCCGACAGTTCCACGCCGATCGACGCCATCGAGCGCGAAGGCAGCCTGCCCTCCCTGACGAGCCTGCGGGCGTTCATCCTGGCGGCGCAATACAAGAGCTTTTCACGGGCGGCGGAAGAGCTGAACATCACGCAGAGCGGCGTCAGCCGCGCCGTGCGCTCCATCGAGGAAATCACCGCGACGCCGTTGTTCGAGCGCACCGGACACGGCCTGGTCCTGACGGAATCGCGCGCGGCCTATTTCGAGGAGGTCTCGACGCTGCTCAGCGAGCTGGGAGCCGCAACACTGAGGCTCGCGACCTACAAGAGCACGCATGAATCGCTCAGCATCGCAACGCTTCCCAGCCTCGGCAGCCGTTGGCTGGCACCGCGCCTGATCCGCTTCCTGAAACAGAACCCGACGATCGACATTTCGGTCACCGGCAGGATCGGCCACTTCGAATTCGATGGCAGCAATATCGATGCCGCCATCCATTATGGCAGTGAAGCGTGGCCTGGAAGCCTGTCGGAACTGATCATGGACGAGGTGCTGGTGCCGATGTGTTCGCCGGCGCTGATCAGGAAGGGCGTTTCCCCGAATGCGCGGCTGCTGTTCGAGCTCACCCTCATCCAGCACACGCACCGGCCGACCGCCTGGCGGGAATGGTTCAAGGATGTCGGCATAGACCATCCGCATCCCAACCAGGGGCCGCGATTCGAGCAATATCAGATGGGCATAGAAGCGGCGATTTCCGGGCTGGGGGCGATCCTGATGCCGCCGTTCATGGTGATCGACGAACTGACATCGGGCCGGCTGGTGCTGCTTCACAGCGTGCCGGTGCCGACGCCGTGGCGGTATTATCTCGTCTATCCCAAAGGCAAACGCAGCAAGCCGGGCGTCCAGAAATTCAGGACGTTTCTGCGGGCCGAGGCGCGGCGCACGGCCGAACAAACCTTGCAGCTGATGCGATAG
PROTEIN sequence
Length: 322
MKRTGPDSSTPIDAIEREGSLPSLTSLRAFILAAQYKSFSRAAEELNITQSGVSRAVRSIEEITATPLFERTGHGLVLTESRAAYFEEVSTLLSELGAATLRLATYKSTHESLSIATLPSLGSRWLAPRLIRFLKQNPTIDISVTGRIGHFEFDGSNIDAAIHYGSEAWPGSLSELIMDEVLVPMCSPALIRKGVSPNARLLFELTLIQHTHRPTAWREWFKDVGIDHPHPNQGPRFEQYQMGIEAAISGLGAILMPPFMVIDELTSGRLVLLHSVPVPTPWRYYLVYPKGKRSKPGVQKFRTFLRAEARRTAEQTLQLMR*