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SCNpilot_expt_1000_bf_scaffold_1736_curated_26

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(24097..25191)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type spermidine/putrescine transport system, ATPase component {ECO:0000313|EMBL:AKI01613.1}; EC=3.6.3.31 {ECO:0000313|EMBL:AKI01613.1};; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.2
  • Coverage: 365.0
  • Bit_score: 562
  • Evalue 4.30e-157
ydcT; spermidine/putrescine ABC transporter ATP-binding protein; K11072 spermidine/putrescine transport system ATP-binding protein [EC:3.6.3.31] similarity KEGG
DB: KEGG
  • Identity: 46.9
  • Coverage: 367.0
  • Bit_score: 302
  • Evalue 1.40e-79
Putative spermidine/putrescine transporter subunit ATP-binding component of ABC superfamily tranporter n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JJ42_STREN similarity UNIREF
DB: UNIREF100
  • Identity: 46.9
  • Coverage: 367.0
  • Bit_score: 302
  • Evalue 4.40e-79

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Taxonomy

Hoeflea sp. IMCC20628 → Hoeflea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1095
TTGGTAGGCCCCATTATCGATGCCGCCGACATTGTGAAGGACTATGGATCGGCGCGCGCACTGCACGGCGTTTCCCTGGAAGTCGGAGCAGGCGAATTTCTGGCGCTGGTAGGACCGTCCGGCTGCGGCAAGACGACACTGCTCAAGATCCTCGCGGGTTTCGAGGAGCCGACCGGTGGCCGCCTCGAAATCCAGGGCAAGGACATGCGCGGCGTTCCCGCCGCCAATCGGCCGACGCGGATGGTATTCCAGAAGCTGGCGCTGTTCCCGCACAAGACCGTTGCCGAAAACATCGGTTTCCCCCTGAAGCTGCAGAAGGTCGAAAAATCGGAATCGGACAGCCGTGTCCGCGCCATGCTCGACCTGATGCATCTCAAGCCGGAATATCTCGACCGCTACCCGGCGCAGCTTTCCGGCGGCGAGCAGCAGCGCGTGGCGCTGGCGCGGGCGCTCGTTTCCCAGCCCGGCGTCCTGCTGCTCGACGAGCCGATGAGCGCGCTGGATGCCAAGCTGAAGAAATCGCTGCAGGCGGAGCTGAAGAAGCTGCACCGCGAGATCGGCACCAGCTTCGTGCTCGTCACCCACGACCTGGAAGAAGCCATGATGCTTGCCGACCGCATCTGCGTCATGCGGAGCGGCCATGTCGTGCAGATCGGCACGCCCGCCGACATCTATTACCGTCCGGCCAACATGTTCGTCGCCGGCTTCATCGGCGAGACGAATTTTTTGCCGGTTACCGCCACGAAAACCGCCGCCGGCGCGACCGTCACCTCTGCCTTGATCCCGGGCGCTTCCGCCGAGATCCCGGCCGAGCACGTCTCGCCGGCCCTGTCCGCCGCCGGCACCGCGCTTCTGGTGCGGCCGGAAAGCACGCGGTTCGTCAAGGGCGATGCGACCTCCGGCGAATGGGTGCTGGACGGCGAAGTCGAAGAATATTTCATCAAGGGCGCCTCGACGCAGTATCGCATCCGCGTTGCCGGCCTGCCCGCCGCCGTCGTCATGGACCTGCCCGGTTCGATCGTGCTGCCGGCCCGCGTCGGTGAAAAGGTCCGGGTCGGTTTCCAGCCCGCTCACGCCTTCCTTCTGTCGGAGTGA
PROTEIN sequence
Length: 365
LVGPIIDAADIVKDYGSARALHGVSLEVGAGEFLALVGPSGCGKTTLLKILAGFEEPTGGRLEIQGKDMRGVPAANRPTRMVFQKLALFPHKTVAENIGFPLKLQKVEKSESDSRVRAMLDLMHLKPEYLDRYPAQLSGGEQQRVALARALVSQPGVLLLDEPMSALDAKLKKSLQAELKKLHREIGTSFVLVTHDLEEAMMLADRICVMRSGHVVQIGTPADIYYRPANMFVAGFIGETNFLPVTATKTAAGATVTSALIPGASAEIPAEHVSPALSAAGTALLVRPESTRFVKGDATSGEWVLDGEVEEYFIKGASTQYRIRVAGLPAAVVMDLPGSIVLPARVGEKVRVGFQPAHAFLLSE*