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SCNpilot_expt_1000_bf_scaffold_1712_curated_5

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(7268..8350)

Top 3 Functional Annotations

Value Algorithm Source
Peptide chain release factor 1 n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LMK3_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 90.5
  • Coverage: 358.0
  • Bit_score: 632
  • Evalue 2.40e-178
prfA; peptide chain release factor similarity KEGG
DB: KEGG
  • Identity: 90.5
  • Coverage: 358.0
  • Bit_score: 632
  • Evalue 7.50e-179
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.3
  • Coverage: 359.0
  • Bit_score: 632
  • Evalue 3.30e-178

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Taxonomy

Rhizobium sp. CF122 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1083
TTGGCTCAGCTTCCTGTTGAAAAGATGCGCGAACTGGAGCGCCGGTTCGGCGAGATCGAGGCGCGCATGTCAGCGGGCCCGCCGGCCGACGTCTATGTGAAGCTGGCTTCGGAATATTCCGAATTGCAGCCGGTGGTCGGCAAGATTCGCGAGTATCAGAAGGCCCAGGCCGAGGCGTCCGATCTCGAAGCCATGCTCGCCGACAAATCCGTCGACCGCGAGATGCGCGATCTTGCCGAAATCGAGCTTCCCGACGTCAGGGACCGACTGGAAGCGCTCGGCAAGGATATCCAGATCCTGCTGCTGCCCAAGGATGCCGCGGACGAGAAGAGTGCCATCCTGGAAATCCGCGCCGGCACGGGTGGGTCCGAGGCGGCATTGTTTGCCGGTGATCTTTTCCGCATGTACGAGCGATTCGCTGCCGCCCACAATTGGAAGGTCGAAGTGCTGTCCGCAAGCGAAGGCGATGCCGGCGGTTTCAAGGAAATCATCGCGACGATCAGCGGCCGTGGCGTCTTTTCCCGCCTGAAATTCGAATCGGGCGTGCACCGCGTCCAGCGTGTTCCGGAAACGGAGGCGAGCGGCCGTATCCACACTTCGGCGGCAACCGTCGCGGTGCTGCCGGAAGCCGAAGAAATCGACATCGAGATCCGCGCCGAAGACATCCGCATCGATACGATGCGCTCTTCCGGCGCCGGCGGCCAGCACGTCAACACCACCGATTCGGCCGTGCGAATCACCCACCTGCCGACCGGCATCGTGGTGACCAGTTCGGAAAAGAGCCAGCACCAGAACCGCGCCAAGGCGATGCAGGTTCTGCGTGCAAGACTTTACGATGCCGAACGGCAGCGCAGCGATAGCGAACGTTCGGCCGAACGCAAGAGCCAGGTCGGTTCCGGTGACCGCTCGGAACGCATCCGCACCTACAATTTCCCGCAGGGCCGGGTAACCGACCACCGCATCAACCTCACCCTCTACAAGCTCGACCGCATGATGATGGGCGAGATCGACGAGGTGGTCGATGCGCTGCTGTCGGATTACCAGGCCGGCCAGCTGGCGCAGCTGGGCGAGCAACAACTGTGA
PROTEIN sequence
Length: 361
LAQLPVEKMRELERRFGEIEARMSAGPPADVYVKLASEYSELQPVVGKIREYQKAQAEASDLEAMLADKSVDREMRDLAEIELPDVRDRLEALGKDIQILLLPKDAADEKSAILEIRAGTGGSEAALFAGDLFRMYERFAAAHNWKVEVLSASEGDAGGFKEIIATISGRGVFSRLKFESGVHRVQRVPETEASGRIHTSAATVAVLPEAEEIDIEIRAEDIRIDTMRSSGAGGQHVNTTDSAVRITHLPTGIVVTSSEKSQHQNRAKAMQVLRARLYDAERQRSDSERSAERKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRMMMGEIDEVVDALLSDYQAGQLAQLGEQQL*