ggKbase home page

SCNpilot_expt_1000_bf_scaffold_8215_curated_7

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(5360..5962)

Top 3 Functional Annotations

Value Algorithm Source
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 200.0
  • Bit_score: 401
  • Evalue 9.10e-109
sodB; superoxide dismutase (EC:1.15.1.1); K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1] similarity KEGG
DB: KEGG
  • Identity: 92.5
  • Coverage: 200.0
  • Bit_score: 398
  • Evalue 1.30e-108
Superoxide dismutase n=1 Tax=Rhizobium sp. CF142 RepID=J2KU01_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 93.0
  • Coverage: 200.0
  • Bit_score: 401
  • Evalue 6.50e-109

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. CF142 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 603
ATGGCTTTCGAACTTCCGCCGCTGCCGTATGACTACGAAGCTCTTGCCCCCTTCATGTCGAAGGAGACGCTCGAATATCACCACGACAAGCATCACAAGGCCTATGTCGACAACGGCAACAAGCTCGCCGCGGAAGCAGGCCTCGGTGATCTCTCGGTCGAAGAGGTGGTGAAAAAATCCTTCGGCACCAATGCCGGCCTGTTCAACAATGCCGCCCAACACTACAACCACATCCATTTCTGGAAGTGGATGAAGAAGGATGGCGGCGGCAACAAGCTGCCGGGCAAGCTGGAAGCGGCCTTCAATTCCGATCTCGGCGGCTACGACAAGTTCAAGGCTGACTTCGTTGCTGCCGGTACCACGCAGTTCGGCTCCGGCTGGGCCTGGGTTTCCGTCAAGAACGGCAAGCTCGAAATCTCCAAGTCCCCGAACGGCGAAAACCCGCTGGTTCATGGCGGTTCGCCGATCCTCGGCGTCGACGTCTGGGAACACTCCTACTACATCGACTACCGCAACGCTCGTCCGAAGTACCTCGAAGCCTTCGTCGACAGCCTGATCAACTGGGACTACGTCCTGGAAATGTACGAAGCTGCTGCCAAGTAA
PROTEIN sequence
Length: 201
MAFELPPLPYDYEALAPFMSKETLEYHHDKHHKAYVDNGNKLAAEAGLGDLSVEEVVKKSFGTNAGLFNNAAQHYNHIHFWKWMKKDGGGNKLPGKLEAAFNSDLGGYDKFKADFVAAGTTQFGSGWAWVSVKNGKLEISKSPNGENPLVHGGSPILGVDVWEHSYYIDYRNARPKYLEAFVDSLINWDYVLEMYEAAAK*