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SCNpilot_expt_1000_bf_scaffold_5234_curated_3

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(3134..4249)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular solute-binding protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D4L1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 87.1
  • Coverage: 371.0
  • Bit_score: 682
  • Evalue 2.70e-193
Spermidine/putrescine-binding periplasmic protein {ECO:0000313|EMBL:EYR82530.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.1
  • Coverage: 371.0
  • Bit_score: 682
  • Evalue 3.80e-193
extracellular solute-binding protein similarity KEGG
DB: KEGG
  • Identity: 86.8
  • Coverage: 371.0
  • Bit_score: 681
  • Evalue 1.90e-193

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1116
ATGAACGGACCGAAATTCCCCTTGAACGACCTGACCCGCCGCCGCCTGCTGCAGGGCGCTGCCGCGCTCGGCGGCGCTGCCGGCCTGTCGACGCTCGGCGTGTCGCGCGCCTTCGCGCAGGAGCCGGAAAAGCCGGCGGAACTCATCGTCCGCGCCTGGGGCGGCAGCTGGGTCGATAGCCTGAAGGCCGGTGTTTCCGATCCCTTCACCAAGGCGACCGGCATCGCCATCCGCCACGACCTGACGGAAGATAACGAGATCCAGCCGAAGGTCTGGGCTGCGGTGGCGCAGAAGCGCGTTCCGCCGATCCACATCAACTGGGATACGACCACCAACGCCACCAAGTCGGCGCTGCGCGGCGTGACGGAAGACCTGTCCGACCTGCCTAACCTGAAGAATACCACCGATCTTTCCAAGCCGGTCGGTCTCGACGGTTATCCGATCGTCAACACCTACGGGTATGTCTACGTTCTCGCCTATCGTCCGGAAGCCTTCCCGAACGGTGCGCCGAAATCCTGGAAGGATCTGCTCGATCCGAAGTTCAAGGGCCGCATCGCGCTTTACAACGACGGCATCGGCTTCCATTTCCCGGCACAGGTCGCCGGCGGCGGCAAGCTGGAAGACATTCCGGGCAACATGCAGGCAGCATGGGATTTCGTCGCCAAGATGAAGGAACAGTCGCCGCTGCTCGGTGAAGATCCTGACTTCACCACCTGGTTCCAGAAGGGCGAGATCGACGCCGCCTGCACCATCTCCACCAATGCCCGCGAAGCCCGCAAGGCCGGCCTCGACATCAAGTGGGTGGTGCCGGAAGAAGGCGCGAAATACGACACCGACGGCCTGTGGATCCCCAAGGGCCTGCCGGAGAACGAACTGTACTGGGCCAAGCAGTACATCGACTTCGCCATCTCCAAGGATGCGCAGCAGGTCTGGCTCGACGGCCTCGGTCTTCCCGGCGTCGTCCCCGGCCTGACGCCGCCGGCAGACCTCGTCGGCGACCCGTCCTACCCGACCACGGAAGAGGAGTTCAAGCACCTCATCCGCATCTCGGCCAAGGTGCAGGTCGAAAACGAGAGCGAGTGGTTCTCGAAGTTCAAGGCGATCATGCAGGGATGA
PROTEIN sequence
Length: 372
MNGPKFPLNDLTRRRLLQGAAALGGAAGLSTLGVSRAFAQEPEKPAELIVRAWGGSWVDSLKAGVSDPFTKATGIAIRHDLTEDNEIQPKVWAAVAQKRVPPIHINWDTTTNATKSALRGVTEDLSDLPNLKNTTDLSKPVGLDGYPIVNTYGYVYVLAYRPEAFPNGAPKSWKDLLDPKFKGRIALYNDGIGFHFPAQVAGGGKLEDIPGNMQAAWDFVAKMKEQSPLLGEDPDFTTWFQKGEIDAACTISTNAREARKAGLDIKWVVPEEGAKYDTDGLWIPKGLPENELYWAKQYIDFAISKDAQQVWLDGLGLPGVVPGLTPPADLVGDPSYPTTEEEFKHLIRISAKVQVENESEWFSKFKAIMQG*