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SCNpilot_expt_1000_bf_scaffold_5234_curated_13

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 13065..13556

Top 3 Functional Annotations

Value Algorithm Source
Chemotaxis signal transduction protein n=1 Tax=Rhizobium sp. CF080 RepID=J2QDQ6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 75.9
  • Coverage: 162.0
  • Bit_score: 247
  • Evalue 1.30e-62
Chemotaxis protein CheW {ECO:0000313|EMBL:KGD98276.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.5
  • Coverage: 162.0
  • Bit_score: 248
  • Evalue 6.20e-63
cheW4; chemotaxis signal transduction protein; K03408 purine-binding chemotaxis protein CheW similarity KEGG
DB: KEGG
  • Identity: 74.8
  • Coverage: 151.0
  • Bit_score: 232
  • Evalue 7.80e-59

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Taxonomy

Rhizobium sp. YS-1r → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 492
ATGAGCCAGGCCCTTAGAAAAGTATCCGAAACCGTCTGGAGCGAAGGCGAGGAACTGGAAGTCCTGACCTTCGACATCGCCGGAGAAACCTTTGCGCTCGAAGCCGTCAGGGTTCGCGAAATCCTCGACCTGCTGCCGGAAACCGTTGTTCCCGGCGCCAAGGCCTTCGTCGGCAGCGTCCTGAATTTTCGCGGGCGGGTGATCCCGCTGGCCGATATCCGGCTTGCCTTCGGCATGGCGGCCACCAAGCAGACGATCGACAGCCGCATCATCGTCATCGAATTCGACATCGAGGACGAAGCGACCCTGATCGGCATCCGCACCGACAAGGTCAACGAGGTCACGACGCTGGCCAAGACGTCGAGCGAACTGCCTCCGAGCGTCGGCATGAAATGGCGGCCGGACTTTATTTCCTGCCTGGTGAAGCGCGGTAACGACTTCATCATCCTTCCAAACTTGCAAGCAATTTTCTCGACATCCCACGACGGCTGA
PROTEIN sequence
Length: 164
MSQALRKVSETVWSEGEELEVLTFDIAGETFALEAVRVREILDLLPETVVPGAKAFVGSVLNFRGRVIPLADIRLAFGMAATKQTIDSRIIVIEFDIEDEATLIGIRTDKVNEVTTLAKTSSELPPSVGMKWRPDFISCLVKRGNDFIILPNLQAIFSTSHDG*