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SCNpilot_expt_1000_bf_scaffold_1415_curated_24

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(24903..25694)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type spermidine/putrescine transport system, permease component II n=1 Tax=Rhizobium sp. CF122 RepID=J3BFF3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 82.5
  • Coverage: 263.0
  • Bit_score: 431
  • Evalue 7.70e-118
ABC-type spermidine/putrescine transport system, permease component II {ECO:0000313|EMBL:EJL49674.1}; Flags: Precursor;; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.5
  • Coverage: 263.0
  • Bit_score: 431
  • Evalue 1.10e-117
potC; spermidine/putrescine transport system permease protein; K11070 spermidine/putrescine transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 81.9
  • Coverage: 259.0
  • Bit_score: 422
  • Evalue 8.60e-116

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Taxonomy

Rhizobium sp. CF122 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 792
ATGCTGCGCCACCGTCTCTCCACCCTCCTTGCCGTCATCTACGCCGCCGCCCTGTTCGGCTTCATTTTCCTGCCGGTGGCGGTGCTGGTGCTGTTCTCCTTCCAGGACGGCCGCCTGCCGGTGCCGCCGTTCAACGGCTTTTCGCTGCAATGGTACGAGGCGATCTTCGCCGACCGCAAGCTGATGGCCGCCCTGCTCAATTCGCTGATCGTCGCCACCGCGTCGTCCGCCGTCGCCTGCCTGCTCGGCTTCATGGCGGCTTACGGTTTCGCCCGCTACAGGCTGCCGGGCTCGGTGCTGCAGCGTGGCCTGCTGATCGCGCCGATGACGGTGAGCTACCTGATCATCGCGCTCGGCCTGCTCACCGTGCTCAATACGCTCGGCATCGGCCTGTCGCTCTGGACGGTCGGCATTGGCCATGTCGTCATCAACCTGCCGCTCTGCTTCGCGATCATCTATTCCTCGATGGGCGATCATCATGTGAACATCGAGCGCGCCGCCCGCGACCTCGGCGCCAGCGACTGGAAGGTGATGCTGCTCGTCACCGCGCCGATGCTGATGCCCTCGATCCTCGCCAGCTTCTTTCTCTCCGTCACCTTCAGCTGGGACGAATTCATCATCGCCTTCCTGCTGTCGCGTTTCAACGTCACTCTGCCGGTGGAAATCTGGAGCCTGTTGCGCTCCGGCCTCAACCCCAAGACCAACGCCATCGGCTCCGTCGTCTTCCTGGCGTCGATCGCGCTGCTCGCCATCCTCGAACTGACCCTCTTCCGGAAAAAGAACACGCCATGA
PROTEIN sequence
Length: 264
MLRHRLSTLLAVIYAAALFGFIFLPVAVLVLFSFQDGRLPVPPFNGFSLQWYEAIFADRKLMAALLNSLIVATASSAVACLLGFMAAYGFARYRLPGSVLQRGLLIAPMTVSYLIIALGLLTVLNTLGIGLSLWTVGIGHVVINLPLCFAIIYSSMGDHHVNIERAARDLGASDWKVMLLVTAPMLMPSILASFFLSVTFSWDEFIIAFLLSRFNVTLPVEIWSLLRSGLNPKTNAIGSVVFLASIALLAILELTLFRKKNTP*