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SCNpilot_expt_1000_bf_scaffold_3652_curated_2

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(1998..2744)

Top 3 Functional Annotations

Value Algorithm Source
Periplasmic binding protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TK13_MESCW similarity UNIREF
DB: UNIREF100
  • Identity: 37.0
  • Coverage: 246.0
  • Bit_score: 149
  • Evalue 3.20e-33
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 37.0
  • Coverage: 246.0
  • Bit_score: 149
  • Evalue 1.00e-33
Periplasmic binding protein {ECO:0000313|EMBL:ADV10270.1}; Flags: Precursor;; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.0
  • Coverage: 246.0
  • Bit_score: 149
  • Evalue 4.50e-33

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Taxonomy

Mesorhizobium ciceri → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 747
ATGCTCGTCGCTCTGGGCATCGAGCCGGTTGCGATTGCGGATGCCAAGGGCTTTTCTCAGCAATTTCCGCACAGTGCCCTGTCTCCCGGCACTGTCGACCTTGGCGCCCGATGGGAGCCCAACCTCGAACTGCTGAAACAGCTGGCGCCCGACGCCGTTCTCGTCGGTGGGCTGGGCATATTTCCGATCGCGGAGAGCATCGCTCCGCCTCTTGTCGTGCAGCTTTACGACGGAAAGGCGCCGCCACTGGCGACCGCCACACGGTCTCTGCTTGAGCTTGGCAAAGCACTGTCGCTGGAGATGCGCGCAGAGCGGTATGTCGCCCAGGTGCAAGCGACATTCGAAAGGGTGCGGGAGCGGTTGACGGAACAGAGAAAAGCCATCCTGATCGTGACGATGGAGCCGGACGGGCTCGACGTCGTGATCCACGGCAGAAACGGACTCATCGGCAATTGTCTCGAACGGGTGGGATTGCAAAACGCCTGGGTCGGCGAGGAGAACAGATGGGGCTTCCGCAAATCGGGCGTGGAGCAATTGCTGCGCTTCGTCGATGCGGATGTGCGCCTGCTGGTGATCGATCAGGGTGCCCGCACGGACAGGGCATTGAGATCGCTTGCAGGCAACGACATCTGGAAGATGGTCATGCCCCGTCCCGAGGCCCTGGTTCGTCTCCCCCCGCTTTTCCCCTTCGGGGCCTTGCCGACCGCCCGGCGTTTCGTGCTGGGGCTTGAAACAGCCATGGCATAG
PROTEIN sequence
Length: 249
MLVALGIEPVAIADAKGFSQQFPHSALSPGTVDLGARWEPNLELLKQLAPDAVLVGGLGIFPIAESIAPPLVVQLYDGKAPPLATATRSLLELGKALSLEMRAERYVAQVQATFERVRERLTEQRKAILIVTMEPDGLDVVIHGRNGLIGNCLERVGLQNAWVGEENRWGFRKSGVEQLLRFVDADVRLLVIDQGARTDRALRSLAGNDIWKMVMPRPEALVRLPPLFPFGALPTARRFVLGLETAMA*