ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2642_curated_19

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(12054..12809)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00036B4170 similarity UNIREF
DB: UNIREF100
  • Identity: 86.1
  • Coverage: 238.0
  • Bit_score: 398
  • Evalue 5.30e-108
Regulatory protein GntR HTH {ECO:0000313|EMBL:CCV15990.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.6
  • Coverage: 222.0
  • Bit_score: 377
  • Evalue 1.40e-101
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.5
  • Coverage: 244.0
  • Bit_score: 248
  • Evalue 2.10e-63

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium sp. STM 4661 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 756
ATGATCAGTCCTCTCTCGCCCCTGCGCGAAACCATTCACAAGCAGACCGCGAAGGACATGATTCGCGACAAGATCGTATCGATGGTCGCTTCCGGCATCCTGCAGATGGGCGACGAACTGCCGAGCGAACGTGAACTGGCGACCATGCTGATGGTCAGCCGCGAAACGGTTCGCGGCGCCATCCAGCGGCTCGCCGGCGAAGGCGTGGTGCAGGTATCGCAGGGCGCACGCACGCGGGTCGCGCGGGTCGATGTCGAGGTCGGCGCGCAACGAATAGGCGTAACCAATCCGACGGCAATCAACGGTTACGGCCTGGAGGCCGTTCATTCCGCCCGGCTTCTCGTCGAAACCGCGGTCGTCGCCGATGCGGCGCGCAACCTCAGCGACGAAGACATCCAGCGGCTGGAGGATTCGATCACGGCGCAGGAACAGGCGGTCAAGGACCCCGTGCTGTTCCTGATCTGCGACCGGGAATTTCACCTGACCATCTATTACGCGTCGCAGAACCGGCTGTTGGCCGATTTCGTCGTGGACCTCTACACTTACATGCTGGATTACCGCCGCATCGCCATGGCGCAGCCCGGCGCCATCGAAAAAAGCCTCGAGGATCACCGGTTTATCGTGCGGGCACTGAAAATGCGCAATCCCGAAGCGGTCGCCGCCGCCTTTTCAGAACACATCCTGCGCATTCACGACACGACGCTGGCGGTCGACCAGGACGGTCGTCTCGGCGACGGCGAAAAAACGACGGCCTGA
PROTEIN sequence
Length: 252
MISPLSPLRETIHKQTAKDMIRDKIVSMVASGILQMGDELPSERELATMLMVSRETVRGAIQRLAGEGVVQVSQGARTRVARVDVEVGAQRIGVTNPTAINGYGLEAVHSARLLVETAVVADAARNLSDEDIQRLEDSITAQEQAVKDPVLFLICDREFHLTIYYASQNRLLADFVVDLYTYMLDYRRIAMAQPGAIEKSLEDHRFIVRALKMRNPEAVAAAFSEHILRIHDTTLAVDQDGRLGDGEKTTA*