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SCNpilot_expt_1000_bf_scaffold_1566_curated_4

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(5455..5718)

Top 3 Functional Annotations

Value Algorithm Source
UPF0335 protein Avi_3695 n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=Y3695_AGRVS similarity UNIREF
DB: UNIREF100
  • Identity: 94.3
  • Coverage: 87.0
  • Bit_score: 166
  • Evalue 1.20e-38
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 94.3
  • Coverage: 87.0
  • Bit_score: 166
  • Evalue 3.70e-39
UPF0335 protein Avi_3695 {ECO:0000255|HAMAP-Rule:MF_00797}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.3
  • Coverage: 87.0
  • Bit_score: 166
  • Evalue 1.70e-38

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Taxonomy

Agrobacterium vitis → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 264
ATGTCTGATGTCCAGGGCGTCGCCCGCGACCAACTCCGCGCCTTTATCGAGCGCATCGAACGTCTGGAAGAAGAAAAGAAGACCATCGCCGACGACATCAAGGACGTCTACGGCGAAGCCAAGGGCATGGGCTTCGACACCAAGATCCTCAAGAAGGTCATCGCATTGCGCAAGAAGGACGAGCAGGAGCGCATGGAAGAGGACCTGATCCTCGATACCTACCTGCATGCGCTCGGCATGATCGACTCGCCGCCGGAAGGCTGA
PROTEIN sequence
Length: 88
MSDVQGVARDQLRAFIERIERLEEEKKTIADDIKDVYGEAKGMGFDTKILKKVIALRKKDEQERMEEDLILDTYLHALGMIDSPPEG*