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SCNpilot_expt_1000_bf_scaffold_6033_curated_1

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(3..509)

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane protein n=1 Tax=Agrobacterium tumefaciens CCNWGS0286 RepID=G6XRN1_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 53.4
  • Coverage: 133.0
  • Bit_score: 150
  • Evalue 1.30e-33
omp; hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 53.4
  • Coverage: 133.0
  • Bit_score: 150
  • Evalue 5.30e-34
Outer membrane protein {ECO:0000313|EMBL:EHH07577.1}; TaxID=1082932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens CCNWGS0286.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.4
  • Coverage: 133.0
  • Bit_score: 150
  • Evalue 1.80e-33

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 507
ATGATCGTTCCGGCTCTGGCGATCGAATGCAAGGCACAGGGAACAATCCCCGTCCAGGAACGTTTAGATGATCGCGAGGAAGAACCGGATATCCTGTCGGAGGGCACCATGAAAGCCATTATCGCAAGTTCGGCCTTATTGCTGGCAACCACACCTGCCTTGGCCGCTGATCTCGTCTACCAGGAGCCCATCGCTCCGGAAGTGATCGCAACGCCCGAGACCTTCAGTTGGAGCGGACCTTATATCGGTCTGCAGGGCGGCGGCAGTTGGCTCAGGGGCGATCTTGACGGTCCTGGTTTCAATGACAGGGAACATTTCAACGGCGGCATCCTAGGCGGTTTCGTCGGCTATAACTATCTCCTCGACAACAATGTGGTTCTGGGTGCCGAAGGCGACCTGAACTACAACTGGAACGAAAAAGGTATCGGCGGCGGCGTCGATGCCGGAACGGATCTAAGCGGATCGGTGCGCGCCCGCGTCGGTTATGCGCTCGACAATGCGTTGATC
PROTEIN sequence
Length: 169
MIVPALAIECKAQGTIPVQERLDDREEEPDILSEGTMKAIIASSALLLATTPALAADLVYQEPIAPEVIATPETFSWSGPYIGLQGGGSWLRGDLDGPGFNDREHFNGGILGGFVGYNYLLDNNVVLGAEGDLNYNWNEKGIGGGVDAGTDLSGSVRARVGYALDNALI