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SCNpilot_expt_1000_bf_scaffold_6033_curated_6

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 4228..4572

Top 3 Functional Annotations

Value Algorithm Source
pH adaption potassium efflux system protein n=3 Tax=Agrobacterium RepID=A9CK78_AGRT5 similarity UNIREF
DB: UNIREF100
  • Identity: 83.2
  • Coverage: 113.0
  • Bit_score: 185
  • Evalue 3.20e-44
Strain MEJ076 contig_11, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ02289.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.5
  • Coverage: 111.0
  • Bit_score: 186
  • Evalue 2.60e-44
phaC; monovalent cation/H+ antiporter subunit C; K05560 multicomponent K+:H+ antiporter subunit C similarity KEGG
DB: KEGG
  • Identity: 83.2
  • Coverage: 113.0
  • Bit_score: 185
  • Evalue 1.00e-44

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 345
ATGGAACTCGTTCTCGCAATCGGTATCGGCGTGATGACCGGCTCCGGTGTCTGGCTTCTCCTGCGCCCGCGCACCTATCAGGTGATCGTCGGGCTTTCGCTGCTGTCTTATGCCGTCAACCTGTTCATTTTCGGCGTCGGCGGCATCAAGCGGCACGCGCCGCCGATCTTGCCGGAGGGCGGTATCGCCGATCCGGCAAAGTTCACCGATCCGGTGCCGCAGGCCCTGGTGCTGACGGCGATCGTCATCGGTTTCGCCACCACGGCGCTGTTCCTGGTGGTACTGCTGGCCTCCCGCGGCCTGACCGGCACCGACCATGTCGACGGGCGGGAGCAGTCGAAATGA
PROTEIN sequence
Length: 115
MELVLAIGIGVMTGSGVWLLLRPRTYQVIVGLSLLSYAVNLFIFGVGGIKRHAPPILPEGGIADPAKFTDPVPQALVLTAIVIGFATTALFLVVLLASRGLTGTDHVDGREQSK*