ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1263_curated_3

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 2330..3115

Top 3 Functional Annotations

Value Algorithm Source
Recombination protein RecR n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HQH9_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 84.4
  • Coverage: 257.0
  • Bit_score: 433
  • Evalue 2.00e-118
Recombination protein RecR {ECO:0000313|EMBL:ERF86686.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.4
  • Coverage: 257.0
  • Bit_score: 433
  • Evalue 2.80e-118
ABC transporter permease; K01995 branched-chain amino acid transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 83.7
  • Coverage: 257.0
  • Bit_score: 430
  • Evalue 3.10e-118

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bradyrhizobium sp. DFCI-1 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 786
ATGGCGGTCAGTGTTGCACAAAGACTGTCCGCCGCCGGCACGGCCAATGCGCTCGAACTGCGCGGCGTCACCCGCATGTTCGGGGCGCTGGTTGCCCTGACCGACGTCTCGCTGACCGTCCGTCCCGGAGAGCGCCGCGCGGTGCTCGGCTCCAACGGCGCCGGCAAGACGACGCTGTTCAACTGCATCACCGGCGATTTCCTGCCGACCTCCGGCACCATCCGGCTGTTCGGCGAGGATGTCACCGAATTCCCGGCCTATGAGCGCATCCGCCGCGGCCTGCGCCGCACCTACCAGATCTCGCTCCTGTTCAACGGCCTGAGCGTCCTCGACAACATCTATCTCGCCTGCCGCGGCGTGTCGCGCGGTCGCTTCTCGCTGATCCGGCCGCGCCGCAACGAGGCGCTGATGCATTCCGCCGAACAGCTCGCCACCGCCGTCCACCTGATCGACGTGCGCGACACCAAGGTTGCCGAACTGTCCTATGGCCAGCAGCGGCAGCTGGAAATCGCCCTGGCGCTCGCCGGCGCCCCGCGCTTCATCCTCTTCGACGAGCCGGCCGCCGGCCTGTCGCCGACCGAGCGGCGCGAGCTGATCGAAATCCTCACGAACCTGCCGGCCCATATCGGCTACATCATCATCGAGCACGACATGGACGTCGCGCTGCGCGTCTCGGAAAGCGTGACGATGATGCACAACGGCCGCATCTTCAAGGAAGGCCGGCCGAGCGAGATCGAAAGCGATCCGGAAGTGCAGGAACTCTACCTCGGAGGCGGTCATGGCTGA
PROTEIN sequence
Length: 262
MAVSVAQRLSAAGTANALELRGVTRMFGALVALTDVSLTVRPGERRAVLGSNGAGKTTLFNCITGDFLPTSGTIRLFGEDVTEFPAYERIRRGLRRTYQISLLFNGLSVLDNIYLACRGVSRGRFSLIRPRRNEALMHSAEQLATAVHLIDVRDTKVAELSYGQQRQLEIALALAGAPRFILFDEPAAGLSPTERRELIEILTNLPAHIGYIIIEHDMDVALRVSESVTMMHNGRIFKEGRPSEIESDPEVQELYLGGGHG*