ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1263_curated_29

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(30992..31270)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding HU-like protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5SRF0_RHIET similarity UNIREF
DB: UNIREF100
  • Identity: 85.7
  • Coverage: 91.0
  • Bit_score: 156
  • Evalue 1.70e-35
DNA-binding HU-like protein similarity KEGG
DB: KEGG
  • Identity: 85.7
  • Coverage: 91.0
  • Bit_score: 156
  • Evalue 5.30e-36
DNA-binding HU-like protein {ECO:0000313|EMBL:AGS24582.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.7
  • Coverage: 91.0
  • Bit_score: 156
  • Evalue 2.40e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium etli → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 279
ATGACAACCACGAATGAAATCGCGGACAAGATCGCTGCCGACAACGGCCTCACCAAGGTTCAGGCAAAAGGTATCGTCGAAGCGGTTTTCCAGGCGATCACCGACGCCGCGACCGCAGGCGCCGAAACCTCCATTCCGGGCTTCGGCAAGTTCAAGGTGAAGTCGACCCCCGAGCGCGAAGGCCGCAACCCGTCCACCGGCGAGAAGGTCAAGATCGCGGCGGCCACCAAGCTCGGCTTCACGCCGGCCAAGGCTCTCAAGGACGCGCTCAACAAGTAA
PROTEIN sequence
Length: 93
MTTTNEIADKIAADNGLTKVQAKGIVEAVFQAITDAATAGAETSIPGFGKFKVKSTPEREGRNPSTGEKVKIAAATKLGFTPAKALKDALNK*