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SCNpilot_expt_1000_bf_scaffold_1146_curated_21

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 16844..17332

Top 3 Functional Annotations

Value Algorithm Source
N utilization substance protein B homolog n=1 Tax=Rhizobium sp. CF142 RepID=J1SRS5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 85.0
  • Coverage: 160.0
  • Bit_score: 275
  • Evalue 2.60e-71
nusB; transcription antitermination factor NusB similarity KEGG
DB: KEGG
  • Identity: 86.2
  • Coverage: 160.0
  • Bit_score: 275
  • Evalue 8.00e-72
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.0
  • Coverage: 160.0
  • Bit_score: 275
  • Evalue 3.60e-71

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Taxonomy

Rhizobium sp. CF142 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 489
ATGAGCAAGCAGGAGCCCGGACAGCCGGTAAAGCCCGCCAACCAGCGCGGCGCAGCCCGTCTTGCTGCGGTGCAGGCGCTTTACCAGATGGATATCGGCGGCGCCGGCGTCCTCGAAGTGGTGGCCGAGTATGAAGCCCATCGCCTCGGCCAGGAAGTGGACGGCGAAACCTATCTGAAGGCCGATGCCGGCTGGTTCCGCTCGATCGTTGCCGGCGTCGTGCGCGACCAGACGAAGCTCGATCCGCTGATCGGCTCGGCGCTGCAGGACGACTGGGCGTTGTCGCGGATGGACAGCACCGTGCGCGCCATCCTGCGTGCCGGCGTCTTCGAGATCATCGAACGCAAGGATGTTCCCGTCGCGGTGATCGTCACCGAATATATGGAAATCGCCCAGGCGTTTTTCTCCGAAGACGAGCCCAAGCTCGTCAACGCCGTTCTCGACCGTATCGCCAAGCAGATACGCGGCGACCAGAAGAAGAAGGACTGA
PROTEIN sequence
Length: 163
MSKQEPGQPVKPANQRGAARLAAVQALYQMDIGGAGVLEVVAEYEAHRLGQEVDGETYLKADAGWFRSIVAGVVRDQTKLDPLIGSALQDDWALSRMDSTVRAILRAGVFEIIERKDVPVAVIVTEYMEIAQAFFSEDEPKLVNAVLDRIAKQIRGDQKKKD*