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SCNpilot_expt_1000_bf_scaffold_1146_curated_24

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(21078..21584)

Top 3 Functional Annotations

Value Algorithm Source
Small protein A (TmRNA-binding) n=1 Tax=Rhizobium sp. CF122 RepID=J2INR2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 73.8
  • Coverage: 168.0
  • Bit_score: 248
  • Evalue 4.50e-63
Small protein A (TmRNA-binding) {ECO:0000313|EMBL:EJL50353.1}; Flags: Precursor;; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.8
  • Coverage: 168.0
  • Bit_score: 248
  • Evalue 6.30e-63
SmpA/OmlA family outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 75.8
  • Coverage: 165.0
  • Bit_score: 247
  • Evalue 3.20e-63

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Taxonomy

Rhizobium sp. CF122 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 507
ATGTCGTTGAGGACACGGTATTTCAAGTCTGAGATCAAATTTGTCAGCAGTGCCGCCCTCGCCCTGATGCTCGCAACCGGGACACTGACCGGATGCGCCTCGACGGGCGAAGTGCTGAACAACGGCTATATCGTCGATGAACAGTCCCTGGCGCTCGCTCCGGTCGGCGCAAGCCGCGAGCAGGTGCTCCTGTCGCTGGGCTCGCCCTCGACGACGGCGACCTTCGACGGCGAGGTTTTCTATTACATTTCGCAGAAGCGCACCCGTCCGGTCGCCTTCATGAAGCCGAAGCTGGTGGATCAGAGCGTGCTCGCCATCTATTTCGACAAGGACGGCGTGGTGACGCAGCGTTCCAACTATACGCTCCAGGACGGCAAGGTCTTCGATACGATCTCGCGCACGACGCCGACGGGCGGCAAGGACCTCACCTTCCTGCAGCAGCTGCTTTCGGGCGGCAGCGCCGCCAACCTGGCGAAGGGCATGATCGGCGGCCAGCCGCAGCAGTAA
PROTEIN sequence
Length: 169
MSLRTRYFKSEIKFVSSAALALMLATGTLTGCASTGEVLNNGYIVDEQSLALAPVGASREQVLLSLGSPSTTATFDGEVFYYISQKRTRPVAFMKPKLVDQSVLAIYFDKDGVVTQRSNYTLQDGKVFDTISRTTPTGGKDLTFLQQLLSGGSAANLAKGMIGGQPQQ*