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SCNpilot_expt_1000_bf_scaffold_2311_curated_11

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(9367..10488)

Top 3 Functional Annotations

Value Algorithm Source
NADH dehydrogenase subunit E {ECO:0000313|EMBL:EMS97889.1}; EC=1.6.5.3 {ECO:0000313|EMBL:EMS97889.1};; TaxID=1281779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens str. Cherry 2E-2-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.4
  • Coverage: 373.0
  • Bit_score: 580
  • Evalue 1.60e-162
NADH dehydrogenase subunit E n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8AAZ7_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 76.4
  • Coverage: 373.0
  • Bit_score: 580
  • Evalue 1.10e-162
NADH-quinone oxidoreductase, E subunit similarity KEGG
DB: KEGG
  • Identity: 75.9
  • Coverage: 373.0
  • Bit_score: 579
  • Evalue 7.80e-163

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1122
ATGTCCGTTCGTCGACTAGCCGAAGAGAACGTCCAGCCGGCAAGTTTTGCCTTTAGCGCGGAAAACGCGGCCTGGGCCGAGGCAACCATCAGGAAGTACCCGCCGGGGCGTCAGCAGTCGGCGGTTATTCCGTTGCTCATGCGTGCACAGGAGCAGGATGGCTGGGTGACGCGCGCTTGTATCGAGGCGGTCGCCGACATGCTGGATATGGCCTATATCCGCGTGCTCGAAGTGGCGACCTTCTATACGCAGTTCCAGCTGAAGCCGGTCGGCACCCGCGCCCACATCCAGGTGTGCGGCACGACGCCATGTATGCTGCGCGGTTCGGAAGAGCTGATCAGCCTGTGCAAGCGCAAGATCCATCCGGAGCCGCTGCACACCAACGACAGCGGCACGCTGTCGTGGGAAGAGGTGGAGTGTCAGGGCGCCTGCGTCAACGCGCCGATGGTGATCATTTTCAAGGATGCCTACGAGGACCTGACGCCTCCGCAGCTTGAATACATCATCGACCGCTTTGAGGCAGGCAAGGGCGCCGACGTTAAGCCGGGCCCGCAGATTGACCGGCATTTCTCGGCGCCGTTCGGTGGCGCGACGACGCTGACCGAAGAGATCGTTCCGCCGAAGTCGCAGCTCGCCGTCGAGCAGGAAGCGGCCGCCGACGCGGTCAGCATTCCGCCCTCGAATGCCGGTCGTGCCAAGACGGATGCCGACGAAACCAATCCGACATTGAAGACGCCGGCAACGGCGCCCGCTGCTGCGGCCGAAAACGCCAAGGCTGCGGAAGCCCAGGCGCCGTCAGGGACGGCGGATGCCGAAAAGGCAAGCGCCAAGCCTTCGCTCGATGATCCCAATCGCCCGAAATCGGTCGACAAGCCGGAAAAGCCGGATGATCTGAAGATGATCTCTGGCGTCGGCCCGAAGATCGAAGGCACCCTGCATGAGCTCGGCATCTTCACCTTCGCGCAGATTGCCGGCTGGCAGAAGGCCGAATGTGACTGGGTCGATGGCTACCTGAATTTCCGCGGTCGTATCGAACGCGACGACTGGGTGCATCAGGCCAAGGTTCTCGCCGAGGGCGGCGAGGAAGAGTATATCAAGGTCTTCGGCAAGAAGCCGCGATAA
PROTEIN sequence
Length: 374
MSVRRLAEENVQPASFAFSAENAAWAEATIRKYPPGRQQSAVIPLLMRAQEQDGWVTRACIEAVADMLDMAYIRVLEVATFYTQFQLKPVGTRAHIQVCGTTPCMLRGSEELISLCKRKIHPEPLHTNDSGTLSWEEVECQGACVNAPMVIIFKDAYEDLTPPQLEYIIDRFEAGKGADVKPGPQIDRHFSAPFGGATTLTEEIVPPKSQLAVEQEAAADAVSIPPSNAGRAKTDADETNPTLKTPATAPAAAAENAKAAEAQAPSGTADAEKASAKPSLDDPNRPKSVDKPEKPDDLKMISGVGPKIEGTLHELGIFTFAQIAGWQKAECDWVDGYLNFRGRIERDDWVHQAKVLAEGGEEEYIKVFGKKPR*