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SCNpilot_expt_1000_bf_scaffold_2311_curated_23

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(19327..20697)

Top 3 Functional Annotations

Value Algorithm Source
Stackhouse genomic scaffold, scaffold_160 n=1 Tax=Chondrus crispus RepID=R7QAP9_CHOCR similarity UNIREF
DB: UNIREF100
  • Identity: 30.3
  • Coverage: 188.0
  • Bit_score: 96
  • Evalue 7.80e-17
Stackhouse genomic scaffold, scaffold_160 {ECO:0000313|EMBL:CDF34471.1}; TaxID=2769 species="Eukaryota; Rhodophyta; Florideophyceae; Gigartinales; Gigartinaceae; Chondrus.;" source="Chondrus crispus (Carrageen Irish moss) (Polymorpha crispa).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 30.3
  • Coverage: 188.0
  • Bit_score: 96
  • Evalue 1.10e-16
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 29.0
  • Coverage: 200.0
  • Bit_score: 76
  • Evalue 2.00e-11

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Taxonomy

Chondrus crispus → Chondrus → Gigartinales → Florideophyceae → Eukaryota

Sequences

DNA sequence
Length: 1371
ATGCCAATTTCTCGATGCAGTAGAGGAAAAAACCCGTTCAAGCGATCGGCTATGTACCTCGCGGTAATCGGCTTGACGGCGCCTTTTCTTTTGATGATCTCCGCTTCTGCAACATCTGCCGCGGATCTCCAGCTATCATCTGTCGAGCTTGGAATGGAAGCTTCGGATGCGATCGAGCACATCAAGACTTTTTACTCCGGTGCCACACTCACCGAGACAAAATACTACACCGGTAAAAACTTTGGTTCATTAACCCCCTGTGAAGATCTGGCAGAAAGGGGTGGCGCGCTCACTGCAGAATGTGAGGACGAGTTGAAGCGGAAGCTTGAACTCGTCGCAGCGTATGATGTTGATCTGTCAGGCGGCAAACGCGAGAGAATTGAGCTCTACACTGCCGGCAAGCCAGGGATCGCAGCGATCTACAGGCAGATCGATACCGCCTCAAAACCTTCGATGTCTCAACAAATCATTTCTGCTCATGGAAAAGGCGTTGATCTGGGCGCAAAGGAAGGGATGATCTGGGGGCCAAGCTGGACGAAAAGCGATGCCTTTGGTGAGCGAGGTGATCCGCGATGTAAAGATATTTGGGGCGATGCACCTTTCCCAAAACAAAACATCCACGTTGATTGTGGCCAGTATCTGCGAACGGACTACTATCGAGCAGTCCTTATCGACAGTTCGCAAACCTCGGAATTCCTTGGCGGTGTGAAAGCGGTGCTTAAAGAGCCGCCGAAGCAGGAAGTGGTCGTAGCGGAGCAGCCAGTGGCGGATGGCGCAATCGCTTCAAGCCGCCAACCGGTACTGAGATCATCGGGCTATGAGCAACACGCGGCGCGGATATCAGGCGGCCAGCCGTTTGAGTTTTCGGACGTAAGCTATCTCTTTACAGGAGGTGTTGCCTACGAGCTTTTGTCGACCTGCAGCCGCGGAAATCTGAATGACGATGATCTCGCTGAAGCACAGACGTTCGCGTATGCGGTCGCTCAGAGAGCCATGGTCGGCAACCAGTGGGGAAATGACGACCTTGGCAAAATGATGGGCTCTCAAGCCCAAGGGATGACGGTTTTTTCCGCCGGAAATTTGTCGGCCCGCGCACTGAAATGCGAGGGCGCGGACATCATTCTCCAGAATGTTGCGACTATCATCAGGTCGAACAAATTAGGCAACTCGGGTGGCGAGGCCATTTTCATCAGCACTTGCAGCCCGGTTCACGGTGAAGCGGGATGCGGATGCTTGGCGCGCCTTGGCAGTGCCGTTTATCCCAACATCTATCAGCTGCAATACTCTCATGACCTCATGGCAGGTATCGTTCAAGGCAATCCCATAGTCGCCCTTCAGATCGTGGGTGCGTGTGGCATCATGAATTACTAA
PROTEIN sequence
Length: 457
MPISRCSRGKNPFKRSAMYLAVIGLTAPFLLMISASATSAADLQLSSVELGMEASDAIEHIKTFYSGATLTETKYYTGKNFGSLTPCEDLAERGGALTAECEDELKRKLELVAAYDVDLSGGKRERIELYTAGKPGIAAIYRQIDTASKPSMSQQIISAHGKGVDLGAKEGMIWGPSWTKSDAFGERGDPRCKDIWGDAPFPKQNIHVDCGQYLRTDYYRAVLIDSSQTSEFLGGVKAVLKEPPKQEVVVAEQPVADGAIASSRQPVLRSSGYEQHAARISGGQPFEFSDVSYLFTGGVAYELLSTCSRGNLNDDDLAEAQTFAYAVAQRAMVGNQWGNDDLGKMMGSQAQGMTVFSAGNLSARALKCEGADIILQNVATIIRSNKLGNSGGEAIFISTCSPVHGEAGCGCLARLGSAVYPNIYQLQYSHDLMAGIVQGNPIVALQIVGACGIMNY*