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SCNpilot_expt_1000_bf_scaffold_1277_curated_8

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 6089..6976

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Rhizobium leguminosarum RepID=UPI00036A2D6A similarity UNIREF
DB: UNIREF100
  • Identity: 54.3
  • Coverage: 289.0
  • Bit_score: 301
  • Evalue 1.00e-78
Transcriptional regulator {ECO:0000313|EMBL:KGF71219.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.5
  • Coverage: 299.0
  • Bit_score: 302
  • Evalue 5.00e-79
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 289.0
  • Bit_score: 293
  • Evalue 6.80e-77

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Taxonomy

Hoeflea sp. BAL378 → Hoeflea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 888
ATGAAACGGGGACGCTTGGCGCTGACGGCGCTGCGCAGTTTCGAGGCCGCCGGCCGGCTGGAAAATTTTACGCTGGCCGCCGAAGAACTGTTCGTGTCGCAGGCGGCGATCAGCCGGCAGATCCGCGGCCTGGAGGAGGAGATGGGCCGGCCGCTGTTCGAGCGCCAGCATCGGCGCGTGGTGCTGACATCCGCGGGGCGAGCGTTGCTCGACGTGCTGACCGCCTGTTTCGACCGCATGGAGAATGCGCTGGGCGCCACGGCGGCGGGCGAGGTGCGGCACCTGGTGCACAGCAGCGTCGAGCCCTCCTTCGCCTCCGGCCGGCTCTTGGCGGCGCTGCCGGATTTTGCGGAAAACAACCCCGATATCGACGTGCAGATGGAATCGGATTCACGCCTTATCGGCTTTCGCGGTAAGGGGCCGGTTCTGGCGGTGCGCTACAGCGCCGGCGCGCGCAGCTGGCCGCGGGTGGAGGCACGGCATCTCTACGATTGCGAGATGGCGGCCGTGGCCGCACCGGATCTGATTGGCGCCAACACCATCCCGGACAAGCCGGCCGACCTCCTGCGGTTTCCGCTGGTGCACGAGGAGAACCGCGATCTCTGGGCACGCTGGTTCTCGACAGCCGGCGTTCACGGCGGCGGTTTCGAGCGCGGACCGATCTTCGACGACGCCTCGCTGGTGCTGCAGGCGGCGATCCGCGGCCAGGGCATCGCCATCGTCGATCTCGCCATGGCGCGCGGCGAGTTGGAAGCCGGACGGCTCGTCCGCCTGTTCGACACGGTGCTTCTGCACGGCGGCTATTTTCTGGTGGCACGGGATTTTCGACGCCTGCCGCCGGCAGCCCGCATCCTTGCGGACTGGCTGGCTGCGGAATTCGGCGCATAG
PROTEIN sequence
Length: 296
MKRGRLALTALRSFEAAGRLENFTLAAEELFVSQAAISRQIRGLEEEMGRPLFERQHRRVVLTSAGRALLDVLTACFDRMENALGATAAGEVRHLVHSSVEPSFASGRLLAALPDFAENNPDIDVQMESDSRLIGFRGKGPVLAVRYSAGARSWPRVEARHLYDCEMAAVAAPDLIGANTIPDKPADLLRFPLVHEENRDLWARWFSTAGVHGGGFERGPIFDDASLVLQAAIRGQGIAIVDLAMARGELEAGRLVRLFDTVLLHGGYFLVARDFRRLPPAARILADWLAAEFGA*