ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1277_curated_13

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(11986..13611)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI000373C912 similarity UNIREF
DB: UNIREF100
  • Identity: 56.9
  • Coverage: 545.0
  • Bit_score: 595
  • Evalue 6.30e-167
diguanylate cyclase/phosphodiesterase similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 527.0
  • Bit_score: 503
  • Evalue 1.00e-139
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:AGB74640.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.2
  • Coverage: 527.0
  • Bit_score: 503
  • Evalue 4.60e-139

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1626
GTGGGAACGTTTGGCGCAGACGATGCGTTGAATTTTTTCGAAGCCTGTCCGTTTGCCGCCCTGTGCATCGGACCGGACGGTCTTATCGTCGCTGCCAACACTGCCGCAGCCGCGATTGCCGGCGGCACCCAGGCCTTGGCCGGCCAGCCGATCGCCGATGTCCTGCCGGAATGGACCGCGCCTTTGGCGAATGCCGCCGCGCCACGCCGCGAGATGGCGCTTGTCCGTGAGGACGGCACCAAGGCGAATGTGGAAGTCTCGATCGTCAAGCTCGGCAGCGCAGGGCTGGTCTGCGCCGTCATCCGCGACATCGGCCGCGAAAAGATGATCGCCGCGCTGCAGACCGAGTTGCAGCGCCAGTCGGAAAAGGCGCTTCTCGATGCGGGTGCGGCCACCCGGCGCCTCGAATATTTCATCGACATGCTGCCGCAGGCCGCCTGCATCTTCGACGCCCAGGACCGCTATGTCCTGTGGAACCGCAAATATGCCGAACTCTATCCGGAGATCGCGCCGCACCTGCGCCCCGGCATCCCGTTCGAGCAGATCCTGCGCATGAGCGTCGACAGCGGCCACATGCCGGAAGCGACGGAAGATCCGGAAGCCTGGTTCGCCGCCCGCATGAAGAAGCAGCGGATGACGGTGTCGCCCCAGGAGGAGCAGAAGCTGAAGGATGGCCGCTGGATGCTGCATGACGACCGGCGTACGCCGGATGGCGGCGCCATCGGCATGCGTATCGATATCACCGACCTCAAGCGCCGCGAGGAGGCGCTTCGCCAGCTTTTCGACGCCAATCCGATGCCGATGATGCTCTGCGACGCCGCCACGCTGGAGATTTCCTCTGTCAACCGCGCCGCGGTGGCGTTGTACGGTTATGTCGGCGAGGCCCTGGTCGGCCGCAACGTCGCCAGCCTCTGTGCGCCCGAGGATGCCGGCCGCTTCGCCGCCGGGCTGCGATCGATGAAGGGTGACAACGAGGCGCGGACGATCTGGCGTCAGACGAGCGCCGACGGGTCCGAACGCGCCGTGATGGTCTATGTGCGCTTCCTCGAAGAAGGCCCGCAACGCCGCCTGCTGCTCGCTATCGCCGACGTCACCGACCGGGTGCGCGCCGAGGCGCATGCCAACCACCTGGCCCATCACGACGCGCTCACCGGCTTGCCGAACCGCATGCATTTTCTTTCGTCGCTGGAAACGGCGCTGGCGATCCGCGATTCCAAGACGCAGATCGCCGTGCATTACCTCGATCTCGACGGTTTCAAGCCGGTCAACGACCGCCTCGGTCACGCCGCCGGCGATGCGTTGCTGGTCGAGGTCGGCCGGCGTCTGCGCTCGGTGGCCGACGAACCGACCCTGGTTGCCCGTCTCGGCGGCGACGAATTCGCCATCATGCAGCCGATCGGCCGGACGCGGCCGGCCGACCTCGCCCAGCGCTGCATCGCCGCCGTGGCCCGGCCCTTCCTTATCCATGCGGAGACGGCCACCATCGGCGTCTCCGTCGGCATCGCCGTTTCGCCGTTTGCGGCGCTCGATCCGGACGGGTTGATGCGCGCCGCCGACAAGGCGCTCTACCGCGCCAAGGCGGCCGGCAAGAACACCTGGGTCGAAACGGAAGTCGCCTGCGTCTGA
PROTEIN sequence
Length: 542
VGTFGADDALNFFEACPFAALCIGPDGLIVAANTAAAAIAGGTQALAGQPIADVLPEWTAPLANAAAPRREMALVREDGTKANVEVSIVKLGSAGLVCAVIRDIGREKMIAALQTELQRQSEKALLDAGAATRRLEYFIDMLPQAACIFDAQDRYVLWNRKYAELYPEIAPHLRPGIPFEQILRMSVDSGHMPEATEDPEAWFAARMKKQRMTVSPQEEQKLKDGRWMLHDDRRTPDGGAIGMRIDITDLKRREEALRQLFDANPMPMMLCDAATLEISSVNRAAVALYGYVGEALVGRNVASLCAPEDAGRFAAGLRSMKGDNEARTIWRQTSADGSERAVMVYVRFLEEGPQRRLLLAIADVTDRVRAEAHANHLAHHDALTGLPNRMHFLSSLETALAIRDSKTQIAVHYLDLDGFKPVNDRLGHAAGDALLVEVGRRLRSVADEPTLVARLGGDEFAIMQPIGRTRPADLAQRCIAAVARPFLIHAETATIGVSVGIAVSPFAALDPDGLMRAADKALYRAKAAGKNTWVETEVACV*