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SCNpilot_expt_1000_bf_scaffold_1277_curated_25

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 26514..28178

Top 3 Functional Annotations

Value Algorithm Source
von willebrand factor type A n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CY75_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 62.4
  • Coverage: 559.0
  • Bit_score: 690
  • Evalue 1.90e-195
von willebrand factor type A {ECO:0000313|EMBL:EYR79218.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.4
  • Coverage: 559.0
  • Bit_score: 690
  • Evalue 2.70e-195
von Willebrand factor type A; K07114 uncharacterized protein similarity KEGG
DB: KEGG
  • Identity: 46.9
  • Coverage: 561.0
  • Bit_score: 480
  • Evalue 9.50e-133

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1665
GTGCGATTTTTCGTCATGGCAGTGCTTCTTTGTCTCTCCACCCTCTTCCGACCCGCCATCGCGGCCGAACAGTCGATCATCGTGCTCGATGCCTCCGGCTCGATGTGGGGCCAGATCGGCGGCAAGACGAAAATGTCGATCGCACGCGAAACGCTGCACCAGGTGCTGCAGTCGATGCCCGCCGACAATCCGCTCGGCCTGATGGTCTACGGCCACCGCGAAAAGGGCTCCTGCAGCGACATCGAGCTTGCCGTGCCGCCGGGCGTCGGCAATGCCGACAAGATCGCCGCCTTCGTCGACGGCATCAACCCGAAGGGCAAGACGCCGCTCAGCGCCGCCGTGCAGCAGGCGGCGGAAGCGCTGAAATATACCGAGGAGAAGGCGACCGTCATCCTCGTCACCGACGGGCTGGAAACCTGCGAGGCCGATCCTTGCGCGCTCGCAAGCCAGCTGGAAAAGCAGGGCGTCGATTTTACCGCCCATGTCGTCGGCTTCGGCCTGACGCCGGAGGAAGGCAAGCAGGTGGCGTGCCTGGCCGAAAACACCGGCGGCAAATATTTCGAGGCCGCCGATGCGCCGCAGCTGGTGGCAGCCCTCAAGGAAACCGTCATCGAGGCGCCGCGGCAGGCAAGCGAAGAGCCGCAGCCGGTGCCGGAAGAACAGGCGGTAGCCCCTGCCTTCAACGTCGAGCCGGATGCGGTGCTCTCCGAAGGCGGTCCTTCGCTTGGCGACAACAACGACGTGCAATGGAAACTCTTCCCCGCCGGGGCTGACGGCCAGCCGGCCGGCGACTATGTCGACCTGACCTACAAGGCGCATTATTCCGTCACCATCCCGCCCGGCAAATATATCGGCGAGGCAACGCTGCGCAGCCTGATCGTGCAGCGGGTGCCGTTCGAGGTGAAGGAGGGCGAGGTCGCCAAGCCCTTCGTGAATTTCGATGCCGCCACCGTGACGCTGGTGCCAAAGCGTTCGGCCGATGGCGAGGCGGACAGCAACGCCGTCATCGAGATGAAATTCGGTCCCTACACGACGACGGAATACGGCCAGAAGACGGTCTATATCTCCGCCGGCACGGCGAATATCAAGGCGAAGATCGGACCGTCCGCGATCGAGGAAACGCTGACGGTGAAGGCGGGCGAAACGCTGACCAAGGAGCTGATCATCGGCTCCGGCATCATCGACAACAAGGCCATCTATGCCGAGGGCGGACCGGACGTCGAATCCAACGACCTGTTCTTCGAAGTCCTGTCGGCCACAAAAAGCATCGACGGCAGCCGCAAATCCTTCGGCTACGCCTACGGCAACGGCACCAAGCTGGACGTGCCCACCGGCGAGTTCATCCTGAAGGCGACGCTCGGCAAGGCGAGCGGCGAAACGCCCTTCTCGATCGGCGCCGGCGAACGCAAGGACGTGTTGGTCAACATCAACGGCGGCGTCGTGGCGATCACCGCGCCGAACGCCTACAAGGTCGTCGTGCTGGAAGCCAAGAAGGATATCCAGGGCAAGCAGAAGGAAATCACCTACAGCTTCGACAGGCAATTCCAGGATACGATGCCGCCCGGCGACTACATCGTGCGCGTGACCTACGAAGGCGACGTCGCGCCAAAGGAAAAGCCCGTCACGGTGAAGGCCGGAGAAAGGGCCGATGTGACGGTGGAATAG
PROTEIN sequence
Length: 555
VRFFVMAVLLCLSTLFRPAIAAEQSIIVLDASGSMWGQIGGKTKMSIARETLHQVLQSMPADNPLGLMVYGHREKGSCSDIELAVPPGVGNADKIAAFVDGINPKGKTPLSAAVQQAAEALKYTEEKATVILVTDGLETCEADPCALASQLEKQGVDFTAHVVGFGLTPEEGKQVACLAENTGGKYFEAADAPQLVAALKETVIEAPRQASEEPQPVPEEQAVAPAFNVEPDAVLSEGGPSLGDNNDVQWKLFPAGADGQPAGDYVDLTYKAHYSVTIPPGKYIGEATLRSLIVQRVPFEVKEGEVAKPFVNFDAATVTLVPKRSADGEADSNAVIEMKFGPYTTTEYGQKTVYISAGTANIKAKIGPSAIEETLTVKAGETLTKELIIGSGIIDNKAIYAEGGPDVESNDLFFEVLSATKSIDGSRKSFGYAYGNGTKLDVPTGEFILKATLGKASGETPFSIGAGERKDVLVNINGGVVAITAPNAYKVVVLEAKKDIQGKQKEITYSFDRQFQDTMPPGDYIVRVTYEGDVAPKEKPVTVKAGERADVTVE*