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SCNpilot_expt_1000_bf_scaffold_8204_curated_6

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(5477..6247)

Top 3 Functional Annotations

Value Algorithm Source
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.9
  • Coverage: 256.0
  • Bit_score: 452
  • Evalue 3.40e-124
tpiA; Triosephosphate isomerase (EC:5.3.1.1); K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] similarity KEGG
DB: KEGG
  • Identity: 85.2
  • Coverage: 256.0
  • Bit_score: 444
  • Evalue 2.10e-122
triosephosphate isomerase n=1 Tax=Rhizobium mongolense RepID=UPI0003B55734 similarity UNIREF
DB: UNIREF100
  • Identity: 88.3
  • Coverage: 256.0
  • Bit_score: 452
  • Evalue 2.40e-124

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Taxonomy

Rhizobium gallicum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 771
ATGACCCCGGATGTTCGCCCGCTTGTCGCGGGAAACTGGAAAATGAACGGCACGCGTGCCTCGCTCGACCAGATCAAGGCGATGGCCGAGGGCGTCCTTTCGCCTCTCTCGGACAAGGTCGAGACATTGATCTGCCCGCCGGCGACGCTGCTTTACGTCGCCACCGCGCTGTGCACCGACAGCCCGCTCGCCATCGGCGCGCAGGATTGCCACCAGAATGCTTCCGGCGCCCATACGGGCGACATTTCGGCCGAGATGATCGCCGATTGCTACGGCACCTATGTGATCGTCGGCCATTCGGAGCGGCGGACGGACCATGCCGAAACCGACCATCTGGTGCGCGCCAAGGCGATTGCCGCCAATGCGGCCGATCTGACCGCGATCGTCTGCATCGGCGAGACGGCCGAACAGCGCCAGGCCGGCCAGACGCTGGACATCCTGAAGCGGCAGCTTGCGGGTTCCGTTCCGGACGAGGCGACTGCGGAAAACACCGTTATCGCCTACGAGCCCGTCTGGGCGATCGGCACCGGCCTGACGCCGACCGTGAAGGATATCGAGGAGGCACATGCCTTCATGCGCAAGGAACTGGTTGCCCGCTTCGGGGACCAGGGCAAGACGATGCGCATCCTATACGGCGGTTCGGTAAAACCCGGCAACGCCAAGGAACTGATGGGGGTCGCCAATGTCGATGGCGCATTGATCGGCGGCGCGAGCTTGAAAGCCGCGGACTTCCTCGCCATCTACCAGGCATACGAAGAATTGCTGGCTTGA
PROTEIN sequence
Length: 257
MTPDVRPLVAGNWKMNGTRASLDQIKAMAEGVLSPLSDKVETLICPPATLLYVATALCTDSPLAIGAQDCHQNASGAHTGDISAEMIADCYGTYVIVGHSERRTDHAETDHLVRAKAIAANAADLTAIVCIGETAEQRQAGQTLDILKRQLAGSVPDEATAENTVIAYEPVWAIGTGLTPTVKDIEEAHAFMRKELVARFGDQGKTMRILYGGSVKPGNAKELMGVANVDGALIGGASLKAADFLAIYQAYEELLA*