ggKbase home page

SCNpilot_expt_1000_bf_scaffold_3536_curated_6

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 4526..5647

Top 3 Functional Annotations

Value Algorithm Source
Major facilitator superfamily protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D3K6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 87.7
  • Coverage: 373.0
  • Bit_score: 645
  • Evalue 3.70e-182
Major facilitator superfamily protein {ECO:0000313|EMBL:EYR81948.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.7
  • Coverage: 373.0
  • Bit_score: 645
  • Evalue 5.20e-182
major facilitator superfamily MFS_1 similarity KEGG
DB: KEGG
  • Identity: 58.2
  • Coverage: 368.0
  • Bit_score: 421
  • Evalue 3.50e-115

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1122
ATGATGGCCGGCGCCAGCGCACCCTCGCCCTTCTATCCCATGCTGCAGCTGCAGATCGGCTTTTCGGCGGCGACGCTCACCGGCATCTTCGCCGTCTATACCGTCGCGCTGCTGGCATCGCTGCTGGTCATGGGGTCGCTGTCGGACCATGTCGGCCGGCGGCCGGTGATCTCGGTCGGCTTTGCGCTGATGGCGCTGAGCCTGCTGTTGTTCTGGCAGGCGGGCGACGTCAGCGGGTTGATCATGGCACGGGTGTTGCAGGGCGTCGCCGCCGGACTGCTGCTGTCGGCGCTCTCCGCGGCGGTGGTCGATCTCGAGCCGAAGGACAGGCCCGGCAGCGCCTCGGTCTGGAACTCCGTCATCCCGCTCGGCGGACTCGCCGTGGGTGCGCTTGCCGCGGGCATCCTGATGGACGTGACCGAGATGGCGGAGGCCGACGTATTCGGCACGCTGGTCGTCGCTTATGTTCTGTTCGCCGCGGCGATCTGGCTCATTCCCGAGACTGCGCCGCGGCATGAAGGTGTCTGGGCCTCGCTCAAGCCGCGGATCGGCGTGCCGGCGACGGCCGCCAAGGCATTCTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGGCGGCCTGTATCTCTCGCTCGGCGCGCCGATCGTCCGCCATGTTTTCGGTGCCGAGGCGCATGTGACGCAGGCCAGCGTCATCGTGCTGCTCTGCGCCGCGGGCGCCGCCGCCTGCTATATGGCGCGCCGCCATTCCTCGCGGCAGGTGACGCTCTACGGAACCTCGGCGCTGTCGATCGGCACCGCGCTGACGCTGGCGGCGATCGCCTGGCAATCCTTGCCGGCCTATCTCGTGGCGCTGGTGATTGCCGGAACGGGCTTCGGCACCTGCTTCTACGGCGTGCTGCGCTCCATCGTCCCGGTCGTCCGTCCGGATGAACGTGGCGAACTCTTCGCCGCCCTGTTCACCCTCAGCTATCTCGCCTTCGGCATACCGACCCTGCTGGCCGGCATGGCGGTCGGCATCTTCGGGCTGACATCGACGACGCTGGGTTACGGCACATTGATCGTGCTGTTCTCGGCGACGGCGGGATTGCTGCGGAAGTTCGGGACACGGGACTGA
PROTEIN sequence
Length: 374
MMAGASAPSPFYPMLQLQIGFSAATLTGIFAVYTVALLASLLVMGSLSDHVGRRPVISVGFALMALSLLLFWQAGDVSGLIMARVLQGVAAGLLLSALSAAVVDLEPKDRPGSASVWNSVIPLGGLAVGALAAGILMDVTEMAEADVFGTLVVAYVLFAAAIWLIPETAPRHEGVWASLKPRIGVPATAAKAFWXXXXXXXXXXXXGGLYLSLGAPIVRHVFGAEAHVTQASVIVLLCAAGAAACYMARRHSSRQVTLYGTSALSIGTALTLAAIAWQSLPAYLVALVIAGTGFGTCFYGVLRSIVPVVRPDERGELFAALFTLSYLAFGIPTLLAGMAVGIFGLTSTTLGYGTLIVLFSATAGLLRKFGTRD*