ggKbase home page

SCNpilot_expt_1000_bf_scaffold_3536_curated_17

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 12773..13468

Top 3 Functional Annotations

Value Algorithm Source
NADH oxidase {ECO:0000313|EMBL:EYR79310.1}; EC=1.-.-.- {ECO:0000313|EMBL:EYR79310.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.6
  • Coverage: 189.0
  • Bit_score: 284
  • Evalue 1.40e-73
Oxidoreductase, FAD/FMN-binding/pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4KD73_PSEF5 similarity UNIREF
DB: UNIREF100
  • Identity: 70.2
  • Coverage: 188.0
  • Bit_score: 269
  • Evalue 3.40e-69
FAD/FMN-binding/pyridine nucleotide-disulfide oxidoreductase similarity KEGG
DB: KEGG
  • Identity: 70.2
  • Coverage: 188.0
  • Bit_score: 269
  • Evalue 1.10e-69

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 696
ATGAACACCGCCATCGATCATAATGCCGCTGCCGACAGCGCATTCCCCCGTCTTTTCCAGCCGCTGCAAATCCGCGGTGTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAACGAGGCGCTGGTTGCCTATCACGAGGCCCGAGCCCGCGGCGGCGTCGGGCTGATCGTCAGCCAGGTCGCCGGCGTGCACGAGACGGCGCGTTATACGTCGCACATGCTGATGGCGACCGAGGACGACTGCATCGACGGCTACCGGAAGCTGGCCGATGCCTGTCACGCGCATGGCTGCATGGTGTTCTCGCAGCTCTTCCACCCCGGCCGCGAGATCATGGAGGGCGGCGACGGCCTGCTGACGGTCGCCTATGCGCCATCCGTATCGCCCAACGAACGTTTTCGCGTCATGCCGCGGCAGCTCGACACGCGCATGATCAGGGAGATCATCGCCGGCTACAGCGAGGCGGCACGGCGCATGCACGAGGCCGGCCTCGACGGCGTGGAATTCGTCGCGAGCCACGGCTATCTGCCGGCGCAATTCTTCAACCCGCGCGTCAACCGCCGGACCGACGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCGGCGACATCGGAGGATTTCGTCATCGGCATGCGGATCAGCTCCGGCGAGCGTGACGAGCACGGCCTGA
PROTEIN sequence
Length: 232
MNTAIDHNAAADSAFPRLFQPLQIRGVXXXXXXXXXXXXXNEALVAYHEARARGGVGLIVSQVAGVHETARYTSHMLMATEDDCIDGYRKLADACHAHGCMVFSQLFHPGREIMEGGDGLLTVAYAPSVSPNERFRVMPRQLDTRMIREIIAGYSEAARRMHEAGLDGVEFVASHGYLPAQFFNPRVNRRTDDXXXXXXXXXXXXXXXXRRHRRISSSACGSAPASVTSTA*