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SCNpilot_cont_750_bf_scaffold_248_curated_16

Organism: scnpilot_dereplicated_Rhodospirillales_2

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 9 / 38
Location: comp(16462..17055)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=RIMM_GRABC similarity UNIREF
DB: UNIREF100
  • Identity: 64.1
  • Coverage: 170.0
  • Bit_score: 200
  • Evalue 1.70e-48
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.1
  • Coverage: 183.0
  • Bit_score: 214
  • Evalue 1.60e-52
16S rRNA-processing protein RimM; K02860 16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 64.1
  • Coverage: 170.0
  • Bit_score: 200
  • Evalue 5.20e-49

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Taxonomy

Acidisphaera rubrifaciens → Acidisphaera → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 594
GTGCCTGACAGCCGCATCCTGCTGGGCGTGATCGGCCGTGCGCATGGCGTGCGCGGCCTGGTGCGGGTGACGTCCCACACCGCCGATCCCGCCGACCTGACCGAATACGGACCGCTCATGGACGAGCGGGGCCGGCGCTTCGTGCTGCGCTGGCGGGGCGAGGGTGTGGCCGAAGTGACCGAACTCGTGGACGGACAGCCGGTGAAGCTCGCCGACCGCTCGGCGGCCGAGAAGCTCACCAACACGCGGCTCTACATCGATCGCAGCGTCCTCCCCGCCCCGGAGGAGGACGAGTTCTACCTGGCCGACCTGATCGGCCTGGATGCGATCGGCGCGGCCGGGCAGGCGATCGGCCGCGTGGCGCTGGTGCACGATTACGGCGCGGGCGCGAGCCTGGAGATCGAACGCGCGGGGGCGCCGGCGCTGCTGGTGCCGTTCACCCGCGCGCTGGTGCCCGAGGTGGATATCGCCGCGGGGCGCGTCACGGTCATCCCGCCGGAGGAAGTGGCGGTCCGTCCCGAGGACCAGGCCGCGGCAGCGCACGGAACGACGCCGGACCAGGAGACGCCGACCGGGGAGGAAGCGTTCGCATGA
PROTEIN sequence
Length: 198
VPDSRILLGVIGRAHGVRGLVRVTSHTADPADLTEYGPLMDERGRRFVLRWRGEGVAEVTELVDGQPVKLADRSAAEKLTNTRLYIDRSVLPAPEEDEFYLADLIGLDAIGAAGQAIGRVALVHDYGAGASLEIERAGAPALLVPFTRALVPEVDIAAGRVTVIPPEEVAVRPEDQAAAAHGTTPDQETPTGEEAFA*