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SCNpilot_cont_750_bf_scaffold_558_curated_22

Organism: scnpilot_dereplicated_Rhodospirillales_1

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: 19681..20346

Top 3 Functional Annotations

Value Algorithm Source
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Pseudomonas syringae Cit 7 RepID=F3H1L9_PSESX similarity UNIREF
DB: UNIREF100
  • Identity: 53.4
  • Coverage: 208.0
  • Bit_score: 215
  • Evalue 5.60e-53
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:EGH53232.1}; TaxID=629264 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae.;" source="Pseudomonas syringae Cit 7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.4
  • Coverage: 208.0
  • Bit_score: 215
  • Evalue 7.80e-53
amino acid ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 40.1
  • Coverage: 222.0
  • Bit_score: 170
  • Evalue 8.40e-40

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Taxonomy

Pseudomonas syringae → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 666
ATGACCTGGGACATCTTCTATACGAGCCTGCCGGAATTGCTGCTCGCCGCCGGCGGGACGCTGCGCATGACGGCATTCGCATTCGTGGTCGCCGCTGTGTTGGGTCTGGTGATCGCTATTCTGCGCCTGTCGGGCGGCATCGTCGGGCGGATCGCGTTCCTCTACATCGAACTGATCCGCGGCATCCCGGCGCTGGTCCTGCTGTTCCTGATCTATTTCGGGCTGGTGCCATTGGGCATCGTGCTGGGCGGCTTTGTCGCCGCAGTGGTGGCGCTTGGACTGAACGGTGCCGCCTACCTGGCCGAGGTCTATCGCGCCGGCATCCAGGCGGTCGATTCCGGCCAGCACGAGGCGGCCCAGATGCTGGGCATGCGCCGCGGGCAGATCATGCGCGACATCACCTTGCCGCAGGCGGTGCCGATCGTGCTGCCGCCGATGGCCAACTACCTGGTATCGCTGCTCAAGGACACTTCGCTTGCATCGCTGATCGCTGCGCCGGAGCTGATGCTGCGCTCGCGTGATCTGGCCGGCACATATTACCTGCCGATGGAATACTACTTGCTGGCGGGGGTGATGTATCTGATCATGGCATGGCCGATGATGCACGGAGTTCGCAAGATGGAGCGGTATTTCGCGCGCGGCCGCTTACAGGGGAGCCGGGCATGA
PROTEIN sequence
Length: 222
MTWDIFYTSLPELLLAAGGTLRMTAFAFVVAAVLGLVIAILRLSGGIVGRIAFLYIELIRGIPALVLLFLIYFGLVPLGIVLGGFVAAVVALGLNGAAYLAEVYRAGIQAVDSGQHEAAQMLGMRRGQIMRDITLPQAVPIVLPPMANYLVSLLKDTSLASLIAAPELMLRSRDLAGTYYLPMEYYLLAGVMYLIMAWPMMHGVRKMERYFARGRLQGSRA*