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SCNpilot_expt_1000_bf_scaffold_287_curated_2

Organism: scnpilot_dereplicated_Sphingobacteriales_6

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 3244..4893

Top 3 Functional Annotations

Value Algorithm Source
Putative nutrient binding outer membrane protein n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7VND3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 54.0
  • Coverage: 487.0
  • Bit_score: 519
  • Evalue 3.40e-144
Putative nutrient binding outer membrane protein {ECO:0000313|EMBL:EPR70887.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.0
  • Coverage: 487.0
  • Bit_score: 519
  • Evalue 4.80e-144
RagB/SusD domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 33.1
  • Coverage: 543.0
  • Bit_score: 280
  • Evalue 8.40e-73

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Taxonomy

Cyclobacterium qasimii → Cyclobacterium → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1650
ATGTATTCAAATAAAAGAATCATTCAATTTTTTAAATACCAGGCAATACTTACCCTTATTGTAATAATGACGGGTAGTTGTAAAAAGTTCCTGGAAGAAGTGCCTACCGGCAACATGACAGATCAAACTGTTTTCACTACAGCCCAGGAAGGTGCAGCACTTATTGTAGGACCTTATCGCTCCTTAGCATCATGGACAGGCGGTGCCGACGACTGGGGTAACTATCTGCCGGCCACATTGGAATATCCAACCGGTAAAGCTTATACATCCGATACCCATGTGCAGATATGGAAATTTCAAACCAACCAGATCTCAGGTGATTTATTGGGAGACTTCAACAATCAGTGGAATAACTGGTACCAGGGCGTGAGAGATTGTAACTTTTCTATCGCTAAAATACCAGGAATAACCGAATGGTCTGACGCAGAAATTCAAAGTGCATTAGCCGAAGTAAGAACACTCAGGGCCTGGTATTACTTTTGTCTTGTTCGCTATTTTGGCGATGTGCCTTTAACTACAACTGTAGTAAGCACGCTGGATAGTGTTCAATTGCCCCGTACTTCTCTCAAGCAGATATATGATGAAGTAATAATCCCTGATCTTGAATTTGCGGTTAGCAGCCCCCTGGCTGATGCCCGTTCAAGCAACGGAAGGGTTACCAAACATGTGGCCCGGGCAATACTGGCTGATGTATATTTAACCTGTGCCGGTTATCCTTACCAGGAAGTAGCCACTGCTCCTGAAAAAAACTGGTGTGTTGATGGATCATGGTCTGCAAGTACATACCCTGTAAATTCGGCTTCTGCCAAAGATTTTTTGAAAAAGGCACAAACCAACCTGAATGTATTGTATGGAGCATATACGCTTGGCACCTATGATGATCTTCACGACCCTGCTAAAAACAATAGTGGTGAAGCTATCTTCCAGGCGCAGTATTTAAGCGGTGTAACCAATAATAGTATAATTCCGGCGGCATTACCTGGTCTCAGCCACGTATCTATGTTTGGAGATGAGTATGGAACTTTCATTCCAAGTACTCCTTATTTTAAATCTTACGACCCCGCCGATAAGCGTATACAGGACAGGCAAATGTTTTACTTTTCCGATACCAAGTCTACTAAATATGATCCTTCCCAGGGTCCTGCAGATAAATTTGGTATGGCTTACCTGTATAAATTTTACGACCAGAGTGCCATTAAAGTAACCGGCCAGTCAGGATTAAACTGGAGCTTCTATCGTTATGCAGATATATTACTGATGCTTACCGAGGTAAACTGGACATTAAGATCGCTGGGAGAAGCAGTGAGCGATGATGATATGATAAAAGGTATAAACCTGGTTAGAGCAAGAGCCCTGCTGCCTGCTTACAGGGCTACAGATATAAATCTCCTGGCAATAATGAGCGAGCGTGCTTACGAACTGGTATTTGAAAACAAAATGCTGTGGGATCAGCGCCGCACCCGTATGTGTTTGGTTGATGGTGAAGGCCAGTTTGCCGCTATTGAATCATTCTTTGGCCATCGCCCGGTTGACTTCAGTTTTGAATTTGGACCAATGAACCTGTTGGCTCCTATTTCAGGTACTGAAATCATCAATAACGCGCAGTGCCTGCAAAACTTCGGATACCTGCCCAAACAATCCGGACAGTAA
PROTEIN sequence
Length: 550
MYSNKRIIQFFKYQAILTLIVIMTGSCKKFLEEVPTGNMTDQTVFTTAQEGAALIVGPYRSLASWTGGADDWGNYLPATLEYPTGKAYTSDTHVQIWKFQTNQISGDLLGDFNNQWNNWYQGVRDCNFSIAKIPGITEWSDAEIQSALAEVRTLRAWYYFCLVRYFGDVPLTTTVVSTLDSVQLPRTSLKQIYDEVIIPDLEFAVSSPLADARSSNGRVTKHVARAILADVYLTCAGYPYQEVATAPEKNWCVDGSWSASTYPVNSASAKDFLKKAQTNLNVLYGAYTLGTYDDLHDPAKNNSGEAIFQAQYLSGVTNNSIIPAALPGLSHVSMFGDEYGTFIPSTPYFKSYDPADKRIQDRQMFYFSDTKSTKYDPSQGPADKFGMAYLYKFYDQSAIKVTGQSGLNWSFYRYADILLMLTEVNWTLRSLGEAVSDDDMIKGINLVRARALLPAYRATDINLLAIMSERAYELVFENKMLWDQRRTRMCLVDGEGQFAAIESFFGHRPVDFSFEFGPMNLLAPISGTEIINNAQCLQNFGYLPKQSGQ*