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SCNpilot_expt_1000_bf_scaffold_2221_curated_3

Organism: scnpilot_dereplicated_Sphingobacteriales_5

near complete RP 46 / 55 MC: 2 BSCG 41 / 51 MC: 1 ASCG 9 / 38
Location: comp(2692..3291)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niabella soli DSM 19437 RepID=H1NL78_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 46.2
  • Coverage: 184.0
  • Bit_score: 167
  • Evalue 1.60e-38
Uncharacterized protein {ECO:0000313|EMBL:AHF17115.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.2
  • Coverage: 184.0
  • Bit_score: 167
  • Evalue 2.20e-38
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 37.5
  • Coverage: 184.0
  • Bit_score: 129
  • Evalue 1.50e-27

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Taxonomy

Niabella soli → Niabella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 600
ATGCCACCCCGTTTTGAAAATCTGATATATTTGATATCTGAAAACGACGATCAGTTGGCTTTTCAGGAATTGTATAACTATTATTTTCCCGGATTGTTTTCTTACACTCTTTCAATAATCAAAGACAAACAACAAAGTGAGGAGATTGTATGTGATGTATTTTACAAACTCTGGCTCAACAGAACCGCCCTGCCATCTATCAATAATTTAGCCGGCTACCTTTACACTTCTACGAAAAACACATCATTTAATTTTCTAAAAAGCAAGCATTCCAAAAACAACGCAAAAACCATTTTAATGGGAGATGCGGGTGACGAATTTGATTCTTTCTTTTACACCGCAGATGAACAAATGGTTCATTCCGAAAATATACAGAAGATTAATGCGGCTATCCAGTCGCTTCCCCCGAAATGTAAACTCATTTTAAGGTTGATTAAAGACGAAAACATGAAGTACTCCGAGGTTGCTAATTTATTGGGCATTTCGGTTAAAGGCGTAGAAAAACAAATGATGGCTGCCTCAAAAAAATTGGTCGAGTCCCTCAAAGGCGACCTTTTAGAATACGTTGTTTTTTTCAGAAAAAAGTATCAAAACAAATAG
PROTEIN sequence
Length: 200
MPPRFENLIYLISENDDQLAFQELYNYYFPGLFSYTLSIIKDKQQSEEIVCDVFYKLWLNRTALPSINNLAGYLYTSTKNTSFNFLKSKHSKNNAKTILMGDAGDEFDSFFYTADEQMVHSENIQKINAAIQSLPPKCKLILRLIKDENMKYSEVANLLGISVKGVEKQMMAASKKLVESLKGDLLEYVVFFRKKYQNK*