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SCNpilot_expt_1000_bf_scaffold_860_curated_6

Organism: scnpilot_dereplicated_Sphingobacteriales_5

near complete RP 46 / 55 MC: 2 BSCG 41 / 51 MC: 1 ASCG 9 / 38
Location: comp(4603..5757)

Top 3 Functional Annotations

Value Algorithm Source
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinopha similarity UNIPROT
DB: UniProtKB
  • Identity: 80.9
  • Coverage: 382.0
  • Bit_score: 630
  • Evalue 1.40e-177
1-deoxy-D-xylulose 5-phosphate reductoisomerase; K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] similarity KEGG
DB: KEGG
  • Identity: 74.9
  • Coverage: 382.0
  • Bit_score: 591
  • Evalue 2.00e-166
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Niabella aurantiaca RepID=UPI000378B8B9 similarity UNIREF
DB: UNIREF100
  • Identity: 83.6
  • Coverage: 384.0
  • Bit_score: 652
  • Evalue 3.10e-184

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Taxonomy

Niabella soli → Niabella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1155
ATGATTAAGCGAATAGCCATTTTTGGTTCCACGGGGTCGATCGGTACGCAGGCTCTTGAGGTGATTGAGGCAAATCCTGATAAGTTTTCAGTTGAAATTTTAACAGCTAATTCTAACGAAACGCTCCTCGTGGAGCAGGCCATAAAATATAATCCGAACATTGTTGTTATTGGTGATGAACTGAAATATACAAAGGTTAAAGAGGCGCTGGCAAATACCTCTGTCAAAGTTTTTGCCGGAGAAGATGCGCTGAAAGAAGTGGCCGGGATGGATTGCTATGATTTGATGCTGGCGGCAATTGTGGGTTTTGCGGGGCTGAAACCAACTTTGAAAGCGATTGAAAACAAAAAGGCAATTGCGCTGGCAAATAAAGAAACACTGGTGGTGGCGGGCGACATTGTAATGCAAAAAGCGATCGAAAACCGGGTGCCAATCATTCCGGTTGATTCGGAACATTCTGCTATTTTTCAATGCCTGATGGGTGAAACCCGCAACAGGGTTGAAAAAGTTTACCTCACCGCGTCCGGCGGGCCGTTTATTGGCCGCAAGCCCAATTATCTGGTGAACGTGAAACGGGAGCATGCGTTGCAGCACCCCAACTGGGAGATGGGGGCAAAAATTTCTGTTGATTCGGCAACGCTCATGAATAAAGGCCTTGAAATGATTGAGGCAAAATGGTTGTTTAATTTGAAACCCGACCAGATAGAAGTGTTAGTGCACCCACAGAGCGCCATACACAGCATGGTGCAGTTCGAAGATGGCAGCATCAAAGCCCAAATTGGCGTGCCTGACATGAAGCTTCCGATTCAATACGCGCTGGCTTTTCCTGCAAGAATACCTAATAACTACCCGAGGTTTAGCTTTAAAAAATTTAACGAATTCACTTTTGAAGAGCCGGATATAAAAACGTTTAAAAACCTGGCTTTGGCCATTGAAGCGCTGCAAAAAGGTGGAAACCTTGCGTGTATTATGAACGCCGCTAATGAAATTGCCGTTTACGCATTTCTTAAAAACAGGCTGGGCTTTTTAGAAATGACCGACGTAATTGAAAAAGTAATGGGCGAAGTGAAATTCATTGACAAACCAACGCTCGAAGATTATTTCGACAGTGACGCTGACGCGCGCACGCTGGCCGCGGATATTATCAGGCTTTAA
PROTEIN sequence
Length: 385
MIKRIAIFGSTGSIGTQALEVIEANPDKFSVEILTANSNETLLVEQAIKYNPNIVVIGDELKYTKVKEALANTSVKVFAGEDALKEVAGMDCYDLMLAAIVGFAGLKPTLKAIENKKAIALANKETLVVAGDIVMQKAIENRVPIIPVDSEHSAIFQCLMGETRNRVEKVYLTASGGPFIGRKPNYLVNVKREHALQHPNWEMGAKISVDSATLMNKGLEMIEAKWLFNLKPDQIEVLVHPQSAIHSMVQFEDGSIKAQIGVPDMKLPIQYALAFPARIPNNYPRFSFKKFNEFTFEEPDIKTFKNLALAIEALQKGGNLACIMNAANEIAVYAFLKNRLGFLEMTDVIEKVMGEVKFIDKPTLEDYFDSDADARTLAADIIRL*