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SCNpilot_expt_1000_bf_scaffold_860_curated_23

Organism: scnpilot_dereplicated_Sphingobacteriales_5

near complete RP 46 / 55 MC: 2 BSCG 41 / 51 MC: 1 ASCG 9 / 38
Location: comp(22494..24287)

Top 3 Functional Annotations

Value Algorithm Source
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.5
  • Coverage: 597.0
  • Bit_score: 1083
  • Evalue 0.0
Elongation factor 4 n=1 Tax=Niabella soli DSM 19437 RepID=H1NJG7_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 90.5
  • Coverage: 597.0
  • Bit_score: 1083
  • Evalue 0.0
GTP-binding protein lepA; K03596 GTP-binding protein LepA similarity KEGG
DB: KEGG
  • Identity: 87.3
  • Coverage: 597.0
  • Bit_score: 1051
  • Evalue 0.0

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Taxonomy

Niabella soli → Niabella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1794
ATGAAGCAAATCAGGAATTTTTGTATCATCGCACATATTGACCACGGCAAAAGTACGCTGGCCGACAGGCTTTTACAAGCCACTAATACTGTTAGCGACCGTGAAATGATGGATCAGGTACTGGATGATATGGACCTCGAACGGGAAAAAGGCATTACCATCAAAAGCCACGCAATTCAAATTAACTACCAACAACATAACGGCGATGAATACGTATTGAACCTGATTGACACCCCCGGCCACGTTGATTTCAGCTACGAAGTGAGCCGCGCATTGGCTGCCTGCGAAGGGGCATTGCTGTTAGTTGACGCCACACAGGGCATACAGGCCCAAACGATCAGCAACCTGTATTTAGCAATTGAGAACGACCTTGAGATCATTCCTGTCATCAATAAAATTGATATGGACGGAGCCATGATCGACGAAGTGAAAGATCAAATCATTGACCTGATCGGCTGTAAGCCCGATGAAATATTGCTCGCCAGCGGACGCACGGGTTTAGGAGTGGAGGCGGTTCTGGAAGCAATTGTTGACCGCATCCCACCGCCAAAGGGCAGTGAAGAAGCGCCGTTGCAGGCGTTGATCTTTGACAGTGTTTTCAATAGTTTCCGAGGTATCATCGTTTATTTTCGTGTATTGAACGGGGTTATAAGAAAAGGTGATAAAGTGAAATTTGTGAGCACCGGGCAGGAATACGATGCTGACGAAATCGGTATTTTGAAATTAAAGATGACCGAAAAAAATGAAGTGAGGGCGGGCGATGTGGGTTATCTGATTACCGGAATAAAAAATGCGAAGGATGTAAAAGTGGGGGATACCATTACGCTTGCAACCAACCAGAATCCGCAGGCCATTAAAGGTTTTGAAGAAGTGAAGCCGATGGTATTTGCGGGAATTTATCCCGTGAATACTGACGAGTTTGAAGAGCTACGCGAATGCATGGATAAGTTGCAGTTAAATGATGCGTNNNNNNNGTTTGAGTTGGAAACCTCGCAGGCATTGGGTTTTGGCTTTCGATGCGGCTTTTTGGGAATGCTGCACATGGAAATTATTCAGGAGCGCCTGGAGCGCGAATTTGACCAGAGTGTAATCACAACCGTTCCTAACGTAAGTTTTATAGCACATACCACCAAGGGCGAAAAAATTGTTGTGAACAATCCTACGGAGTTTCCTGACCCTGTTAAAACAGATAGGATAGAAGAGCCTTACATCAAAGCGCAGATTATTACAAAACCCGAATACATCGGTAATATTATTACCCTTTGTATGGGCAAGCGCGGCATTTTAACCAGCCAGAATTATTTAACCACAACCCGTGTGGAGTTGAATTTTGAAATGCCCCTGACTGAAATTGTTTTTGATTTTTACGATAAATTAAAATCCTCCACCCGTGGCTATGCTTCGTTCGATTATCATCCCATCGGTTACCGTGAAAGTGATATTGTGAAGATGGATATTTTATTAAACGGTGATAAAGTAGATGCGTTAAGCGCCTTAATTCACCGCAGCAGGGCACAGGATTTCGGCCGCAAGCTTTGTGAAAAATTAAAAGAACTCGTTCCGCGCCAGCAGTTCCAGATAGCAATTCAGGCCGCAATTGGCGCCAAGATCGTTGCCCGTGAAAATATTTCGGCCATGCGCAAAGATGTGACCGCGAAATGTTATGGTGGCGATATCAGCCGTAAGCGAAAGCTTCTCGAAAAGCAGAAGGAAGGCAAGAAGCGCATGAAGCAAATCGGTAATGTGGAAGTTCCGCAGGAGGCGTTTTTAGCAGTGTTGAAACTGGACGATTAA
PROTEIN sequence
Length: 598
MKQIRNFCIIAHIDHGKSTLADRLLQATNTVSDREMMDQVLDDMDLEREKGITIKSHAIQINYQQHNGDEYVLNLIDTPGHVDFSYEVSRALAACEGALLLVDATQGIQAQTISNLYLAIENDLEIIPVINKIDMDGAMIDEVKDQIIDLIGCKPDEILLASGRTGLGVEAVLEAIVDRIPPPKGSEEAPLQALIFDSVFNSFRGIIVYFRVLNGVIRKGDKVKFVSTGQEYDADEIGILKLKMTEKNEVRAGDVGYLITGIKNAKDVKVGDTITLATNQNPQAIKGFEEVKPMVFAGIYPVNTDEFEELRECMDKLQLNDAXXXFELETSQALGFGFRCGFLGMLHMEIIQERLEREFDQSVITTVPNVSFIAHTTKGEKIVVNNPTEFPDPVKTDRIEEPYIKAQIITKPEYIGNIITLCMGKRGILTSQNYLTTTRVELNFEMPLTEIVFDFYDKLKSSTRGYASFDYHPIGYRESDIVKMDILLNGDKVDALSALIHRSRAQDFGRKLCEKLKELVPRQQFQIAIQAAIGAKIVARENISAMRKDVTAKCYGGDISRKRKLLEKQKEGKKRMKQIGNVEVPQEAFLAVLKLDD*