ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2413_curated_10

Organism: scnpilot_dereplicated_Sphingobacteriales_5

near complete RP 46 / 55 MC: 2 BSCG 41 / 51 MC: 1 ASCG 9 / 38
Location: comp(9334..10005)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LuxR family n=1 Tax=Niabella soli DSM 19437 RepID=H1NKB9_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 43.9
  • Coverage: 214.0
  • Bit_score: 188
  • Evalue 9.60e-45
Uncharacterized protein {ECO:0000313|EMBL:AHF18110.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.9
  • Coverage: 214.0
  • Bit_score: 188
  • Evalue 1.30e-44
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 37.7
  • Coverage: 212.0
  • Bit_score: 148
  • Evalue 2.70e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Niabella soli → Niabella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 672
ATGAAATATGAGAATGCCATACAGGTGTTCATTGCCGATGACCAGCCACATTGCCTCGAAGCTGTACAGTTAGCCCTGGAAGATGCCCCGGATATTTACATCGCGGGCACTGCCCGCAACGGCTTCGAACTCCTCCACCTGCTGCAGGAACAAACCCCGCATGTAGTGATCATGGATATTTACATGAAGGCCATGGATGGGATCAGAGCTACCGGGCTGGTTAAAGAGTTTAATGAAAACATTAAAGTGATCGGCTTTACGCAATACACCGATGAGCAGCTTTTTATTGAAATGATGCAGGCAGGCGCCGATGGTTATCTTTTAAAAAATGCAGACAGCCAAACAATGATAAAAGCCGTACGCACGGTGATGAATGACGGTAATTTTTTTTGCAGCAGAACAATGGGCAAACTGGTTAAGTTGTTCAGGCAGGGCATTTACCGGCCTTCGCCCGAACCCATTGGCCCCGGGTTTTTTACCGGGAAAGAGAAAGAGGTTTTACTGGGCGTTTGTGAGGGGCTGGGCGCCAAACAAATCGCCTGGAAACTGAGTTTAACTGAAAATACCGTAAATAAGTATAAGGCAAACCTTCGTAAAAAAACCAACCGCCTGAACGATGCCATGCTGGTGGTATTTGCCATACAGCACCACCTGTATATTCCCGATGCATAG
PROTEIN sequence
Length: 224
MKYENAIQVFIADDQPHCLEAVQLALEDAPDIYIAGTARNGFELLHLLQEQTPHVVIMDIYMKAMDGIRATGLVKEFNENIKVIGFTQYTDEQLFIEMMQAGADGYLLKNADSQTMIKAVRTVMNDGNFFCSRTMGKLVKLFRQGIYRPSPEPIGPGFFTGKEKEVLLGVCEGLGAKQIAWKLSLTENTVNKYKANLRKKTNRLNDAMLVVFAIQHHLYIPDA*