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SCNpilot_expt_500_bf_scaffold_107_curated_30

Organism: scnpilot_dereplicated_Sphingobacteriales_7

near complete RP 53 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: 32024..33373

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDG1_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 63.6
  • Coverage: 439.0
  • Bit_score: 560
  • Evalue 1.90e-156
two component, sigma54 specific, transcriptional regulator, Fis family similarity KEGG
DB: KEGG
  • Identity: 63.6
  • Coverage: 439.0
  • Bit_score: 560
  • Evalue 5.90e-157
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:AEW00411.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.6
  • Coverage: 439.0
  • Bit_score: 560
  • Evalue 2.60e-156

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1350
TTGACTTTGAAAAACATTCTGATCATAGACGATGAAGAACAGCTCCGGAAGTTGCTGAGCCGGATTATTGCGCTGGAAGGTTTTTCGGTTACGGAAGCCTCTACCATAAAAGCCGCAACGATACAACTGCAACAACAGCAACCCGAAGTCATTCTCTGCGATGTACGCCTGCCTGATGGCAACGGCGTTGATTTTGTGGCAACCGTAAAAAAAGCATATCCCGGCACGGAGATCATTTTGCTTACCGCATTCGGCAATATTCCCGATGGGGTGAACGCCATGAAGAAAGGAGCGTTTGATTACCTGGTAAAAGGAAACGACAACGACCGCATCATTCCGCTGCTGCACCAGGCCGTAGAGCAGGCACTGCTCAACCGGAAGAATGCGGTAAAACTGGAATTGACCGACAAATACAGATTTGAGACCATCATCGGCCAAAGCAAAAGCATACAAACGGCGATCAACCTCGCCAAACGCATAGCCCCCGGCGATTCCACTGTACTGTTGTTGGGAGAAACCGGCTCGGGTAAGGAAGTTTTTGCCAATGCCATTCACCAAAGCAGCAAACGAAAAGACCAGCCTTTCATCGCGCTCAATTGCAGCGCTTTTGCCAGAGACCTGCTCGAAGGAGAACTGTTCGGTCACAAAGCCGGCGCATTTACGGGAGCCACCAAAGACAAAAAAGGATTGATTGAAATGGCCAACGGCGGCACACTCTTCCTGGATGAAATAGGCGAGTTGCACATCGACCTGCAGGCAAAGCTGCTGCGCGTGCTGGAAAATGGTCAGTTCATCAAACTCGGCGATACAAAAGTTTCATCGGCCGATGTGCGCATCATAGCAGCCACCAACAGGGATTTACAGACCGAAGCAGGGCAGGGGCGTTTCCGTGAAGATCTTTATTATCGCCTCAATGTATTCAGCATACCACTTCCCGCACTGCGCGAACGCAGAGAAGATATTCCGGCACTGGTTGAAGTATTTCTTCAACAACTCGCTAAAAAAAATCAGGCGCCTGCACCGACCGTGAGTGCGGAAGCCATGTCCTTGCTGAAAAAATATTCCTGGAAAGGAAATATCCGGGAATTGAAGAACGTGCTCGAAAGAGCATTTGTGTTACAGGATGACCAGCTGATTCTCCCGGAACATCTGCCTTTCGAGATACAACAACATTCGGTTGCTTCAACAGCCGGCCTTTCGCTCGCGAATGTGGAGCAACAGCATATCCGCAAAATATTACAGGCAACACAATGGAATAAAACGCGCGCTGCCAAACTACTCGAGATCGGACTGGCCACACTTTACCGCAAAATGGAAGAATACCAGATATCACCGGATCTATCAAAATGA
PROTEIN sequence
Length: 450
LTLKNILIIDDEEQLRKLLSRIIALEGFSVTEASTIKAATIQLQQQQPEVILCDVRLPDGNGVDFVATVKKAYPGTEIILLTAFGNIPDGVNAMKKGAFDYLVKGNDNDRIIPLLHQAVEQALLNRKNAVKLELTDKYRFETIIGQSKSIQTAINLAKRIAPGDSTVLLLGETGSGKEVFANAIHQSSKRKDQPFIALNCSAFARDLLEGELFGHKAGAFTGATKDKKGLIEMANGGTLFLDEIGELHIDLQAKLLRVLENGQFIKLGDTKVSSADVRIIAATNRDLQTEAGQGRFREDLYYRLNVFSIPLPALRERREDIPALVEVFLQQLAKKNQAPAPTVSAEAMSLLKKYSWKGNIRELKNVLERAFVLQDDQLILPEHLPFEIQQHSVASTAGLSLANVEQQHIRKILQATQWNKTRAAKLLEIGLATLYRKMEEYQISPDLSK*