ggKbase home page

SCNpilot_cont_1000_p_scaffold_33_curated_4

Organism: scnpilot_dereplicated_Sphingobacteriales_4

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 3282..3965

Top 3 Functional Annotations

Value Algorithm Source
IS1 transposase n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FDT6_FLAJ1 similarity UNIREF
DB: UNIREF100
  • Identity: 50.7
  • Coverage: 217.0
  • Bit_score: 209
  • Evalue 3.10e-51
Transposase {ECO:0000313|EMBL:KJS06196.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.4
  • Coverage: 218.0
  • Bit_score: 235
  • Evalue 7.50e-59
IS1 transposase similarity KEGG
DB: KEGG
  • Identity: 50.7
  • Coverage: 217.0
  • Bit_score: 209
  • Evalue 9.90e-52

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavobacteriales bacterium BRH_c54 → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 684
ATGAAGTGTCAATATTGCAAAGGAAGCTGTCAAAAGGCCGGCAGGCAGAAAAATGGGGCTCAAAAATATTTTTGTAAGGCATGCAAGCGATATCAGCAATCAATTTATCGGAACCAGGCATGGAAAGCGGGGACTAACCAGATGATTGTAACGCTGGTATGTGAGGGCGTAGGGGTACGGAGTATAGCAAGAATACTGAAAATGGCTGTCAATACGGTACTGCAGAGGATCAGGCGTATAGCGAGCGAGATAGTCAAGCCTGCGATCCGTCGTCATCAGCAGGCGCTGGAAGTGGATGAACTAAGAACGTTTGTCGGTCGTAAAGGAAATGAGTATTGGATAGCCTATGCATTGAACAGCCGGACGGGAGAGGTAGTTGATGTGGTAATTGGCAAGCGGACGAAGAACACCTTGCGGATGTTGGTAAATACATTGCTGCTATCAGCGGTAAAAGTTATAAAGACGGACAAACTAAGTCTATACCGGGGATTAATCCCGGCTTCGATCCATTGCTATCGAGCTAATGCCACTAACCATATTGAACGAAAGAACCTAACGCTACGGACCCATCTAAAGCGGCTCAGCAGGCGGACGATTTGTTTTAGCCGCAGTTTCGATATGTTGGAAAACTGTATGAAGATTTACTTCTGGGGGAAAACATACTGTCTATTCCGTTCCAAGTAA
PROTEIN sequence
Length: 228
MKCQYCKGSCQKAGRQKNGAQKYFCKACKRYQQSIYRNQAWKAGTNQMIVTLVCEGVGVRSIARILKMAVNTVLQRIRRIASEIVKPAIRRHQQALEVDELRTFVGRKGNEYWIAYALNSRTGEVVDVVIGKRTKNTLRMLVNTLLLSAVKVIKTDKLSLYRGLIPASIHCYRANATNHIERKNLTLRTHLKRLSRRTICFSRSFDMLENCMKIYFWGKTYCLFRSK*