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SCNpilot_cont_1000_p_scaffold_33_curated_23

Organism: scnpilot_dereplicated_Sphingobacteriales_4

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(22291..22854)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Herbaspirillum seropedicae RepID=UPI0002EBF1D3 similarity UNIREF
DB: UNIREF100
  • Identity: 34.4
  • Coverage: 163.0
  • Bit_score: 97
  • Evalue 1.10e-17
Membrane protein {ECO:0000313|EMBL:GAL87648.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.4
  • Coverage: 158.0
  • Bit_score: 109
  • Evalue 5.10e-21
putative outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 36.1
  • Coverage: 158.0
  • Bit_score: 95
  • Evalue 1.70e-17

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Taxonomy

Sporocytophaga myxococcoides → Sporocytophaga → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 564
ATGCCAAAAAATTACCCGGCATCCCGGCACAATACCCGTGTCTCCCGGATGATGTCCTTACTGCTACCAATCTCTATTCTCATGGGATGTTCCAAATCCAACCATAGTTCTCCGGCAAGTCCCTTAAATGACATGGATCATAAATTCCTCACCGACGCAAGCTTCAGTAATTATGACGAAATTGATGCAAGCAAACTGACTTCTTCGCAAAGCTCCAATGGAGAAGTAAAAACGCTCGGCCAGGAGATGATAAATGATTACAGAACTTCCGAGTCCGAGCTGGGAAATATCGCGGATAGTTTAAAAGTCCCTATACCCGCAGAGCCGGACTCTGCCCACAAACTCAAAATAAATAAATTAATGGCGTTATCCGGCGCGGCATTCGACACTACCTACCTGCGTGACATGATCAATGATCACCAGGGCGCCATCTCTCTTTTCCAGAAGGAATTGAACACCGGGCAGTCCGCCAGGTTACAACAGTTTGTCAATAAGTATCTCCCCAGGATACAGAGACATCTGACAATAGCAGACAGTATTATGGGAGTATTGCAGCAACATTGA
PROTEIN sequence
Length: 188
MPKNYPASRHNTRVSRMMSLLLPISILMGCSKSNHSSPASPLNDMDHKFLTDASFSNYDEIDASKLTSSQSSNGEVKTLGQEMINDYRTSESELGNIADSLKVPIPAEPDSAHKLKINKLMALSGAAFDTTYLRDMINDHQGAISLFQKELNTGQSARLQQFVNKYLPRIQRHLTIADSIMGVLQQH*