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SCNpilot_expt_1000_bf_scaffold_661_curated_19

Organism: scnpilot_dereplicated_Sphingobium_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 19767..20813

Top 3 Functional Annotations

Value Algorithm Source
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.4
  • Coverage: 346.0
  • Bit_score: 565
  • Evalue 6.30e-158
tRNA-dihydrouridine synthase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISW4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 82.4
  • Coverage: 346.0
  • Bit_score: 565
  • Evalue 4.50e-158
putative tRNA-dihydrouridine synthase similarity KEGG
DB: KEGG
  • Identity: 82.4
  • Coverage: 346.0
  • Bit_score: 565
  • Evalue 1.40e-158

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Taxonomy

Sphingobium sp. SYK-6 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1047
ATGAAATCGTTGTTGAAAAGTTTCCAGCTCGGCCCCGTCACGATTGCGCAGCCGGTAATCCTTGCGCCGATGACCGGCGTCACCGACATGCCGTTCCGCACCCTCGTGCGCCGCTACGGCTCGGGCCTCAACGTAACCGAGATGATCGCCTCGCCCGCGATGATCCGCCAAACCCGCCAGTCGCTCCAGAAGGCGGCATGGCATCCGAGCGAGGAGCCGTGTTCGATGCAGCTCGCCGGCTGCTCGCCCGCCGAGATGGCAGAGGCGGCCAAGCTCAACGCCGATCGCGGTGCCGCGATTATCGACATCAACATGGGCTGTCCGGTCAAGAAGGTGGTCAACGGTGACGCCGGCTCCGCCCTGATGCGCGACCTGCCGCTCGCCGCCAGCCTGATCGAGGCGACGGTCAAAGCGGTCGACGTACCCGTCACGGTGAAGATGCGCATGGGCTGGGATCACGCCAGCCTCAACGCCCCGGAACTGGCGCATATCGCCGAGGATCTCGGCGCGAAGATGATTACCGTCCACGGCCGCACCCGCAACCAGATGTACAAGGGCACGGCCGACTGGGCCTTCGTGCGCAAGGTCAAGGAAGCGGTGAGACTGCCCGTCATCGTCAACGGCGACATCTGCTCTATCGAGGACGCCCGCACGGCGCTGGAGCAAAGCGGCGCTGACGGCGTGATGATCGGCCGTGGCGCCTATGGCCGCCCGTGGCTGCTCGGGCAGGTGATGGCGGCGCTGTGCGACGGCGTGCCCGCCCCGGACCCGACAATCGAGGCGCAATACGGCCTGATCGTCGAGCATTATCACGCGATGCTCGCCCATTATGGCGAGACGACCGGCGTCAACATGGCCCGCAAGCATCTTGGCTGGTATACGCGCGGCCTGCCCGGCTCGGCAGAGTTCCGCAACACCGTCAATCAGGTGCCGGAAGCGGCCAAGGTCCTGGATATGCTGGCGCGCTTCTACGAGCCGTTCATCGCGCGGCCCCACCTCGCACGGCCGACGCCGGCCGCGCCCGATCTCGTCCTGAATGCCGCCTGA
PROTEIN sequence
Length: 349
MKSLLKSFQLGPVTIAQPVILAPMTGVTDMPFRTLVRRYGSGLNVTEMIASPAMIRQTRQSLQKAAWHPSEEPCSMQLAGCSPAEMAEAAKLNADRGAAIIDINMGCPVKKVVNGDAGSALMRDLPLAASLIEATVKAVDVPVTVKMRMGWDHASLNAPELAHIAEDLGAKMITVHGRTRNQMYKGTADWAFVRKVKEAVRLPVIVNGDICSIEDARTALEQSGADGVMIGRGAYGRPWLLGQVMAALCDGVPAPDPTIEAQYGLIVEHYHAMLAHYGETTGVNMARKHLGWYTRGLPGSAEFRNTVNQVPEAAKVLDMLARFYEPFIARPHLARPTPAAPDLVLNAA*