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SCNpilot_expt_1000_bf_scaffold_753_curated_32

Organism: scnpilot_dereplicated_Sphingobium_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(35701..37101)

Top 3 Functional Annotations

Value Algorithm Source
pdhB; pyruvate dehydrogenase E1 component subunit beta; K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] similarity KEGG
DB: KEGG
  • Identity: 84.7
  • Coverage: 470.0
  • Bit_score: 787
  • Evalue 2.30e-225
Pyruvate dehydrogenase E1 component subunit beta {ECO:0000313|EMBL:BAK67074.1}; EC=1.2.4.1 {ECO:0000313|EMBL:BAK67074.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 470.0
  • Bit_score: 787
  • Evalue 1.00e-224
Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIF1_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 84.7
  • Coverage: 470.0
  • Bit_score: 787
  • Evalue 7.50e-225

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Taxonomy

Sphingobium sp. SYK-6 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1401
ATGGGCCTGGAAATCAAGATGCCCGCCCTCTCGCCGACCATGGAAGAGGGCACGCTGGCCAAGTGGCTCGTCAAGGAAGGCGATACGGTCAAATCCGGCGACATCATGGCCGAGATCGAGACCGACAAGGCGACCATGGAGTTCGAGGCGGTCGACGAGGGGACGATCGAGAAGATCCTGGTGCCGGAAGGGACCGACAATGTGAAGGTCGGCACCGTCATCGCCGTGTTGGCGGGCGAGGGCGAAGAGACGCCCGCCGCCACCCCGCAGCAGGCCGAGGCGCCCAAGGCGGAAGCCCCCGCGCAGCCGCAGCCGGTGGCCGAATCGTCCGGCGCGACGAAGGCGGAGACCGGTACCGGCAACCTTGCCGGCGGGCGCACCGCGCCGGCGGCCGATCCGGCGATTCCGGCCGGCACGCCGATGCAGAAGATGACGGTACGCGAGGCGTTGCGCGACGCCATGGCCGAGGAGATGCGGCGCGACCCCGATGTGTTCCTGATGGGCGAGGAAGTCGCCGAATATCAGGGCGCCTACAAGGTGACGCAGGGGCTGCTGGAGGAATTCGGCGAACGCCGGGTGATCGACACGCCGATCACCGAGCACGCCTTTGCCGGCCTGGGCGCCGGCGCGGCGATGGGCGGTCTCAGGCCGGTGGTCGAGTTCATGACCTTCAACTTCGCCATGCAGGCGATGGACCAGATCATCAACTCGGCGGCCAAGACCAACTATATGTCTGGCGGCCAGATGCGCTGCCCGATCGTGTTTCGCGGTCCTAACGGCGCGGCCAGCCGTGTCGCCGCGCAGCATAGCCAGAATTATGGCCCCTGGTATGCGGCTGTGCCCGGCCTTATCGTCATCGCGCCTTATGATGCGGCGGACTGCAAGGGGCTGCTCAAGGCGGCAATCCGGAGCACCGATCCGGTCGTGTTCCTGGAGAACGAGCTGGTCTACGGCCGCAGCTTCGAAGTGCCGCAGATCGACGACTATGTGCTGCCGATTGGCAAGGCGCGGATCGTGCGGCCGGGCAAGGACGTGACGGTGGTCAGCTACTCGATCGGCGTCGGCGTCGCCCTGGAGGCAGCAGAGGCGCTGGCCGGCGAGGGCATCGACGCGGAGGTGATCGACCTGCGCACGCTCCGCCCGCTCGACACGCGCACCGTGCTCGACAGCCTCGCCAAGACCAACCGCCTCGTCGTGGTCGAGGAAGGCTGGCCGGTCTGCTCGATCGCTAGCGAGATTGCGGCGGTCTGCATGGAGCAAGGCTTCGATGACCTCGACGCGCCGGTGCTGCGCGTCACTAACGAAGACGTGCCGCTGCCCTACGCCGCCAATCTGGAGAAGGCTGCGCTGGTCGACGCAGCGCGGGTGGTCGCGGCGGCGAAGAAGGTTTGCTATCGGTGA
PROTEIN sequence
Length: 467
MGLEIKMPALSPTMEEGTLAKWLVKEGDTVKSGDIMAEIETDKATMEFEAVDEGTIEKILVPEGTDNVKVGTVIAVLAGEGEETPAATPQQAEAPKAEAPAQPQPVAESSGATKAETGTGNLAGGRTAPAADPAIPAGTPMQKMTVREALRDAMAEEMRRDPDVFLMGEEVAEYQGAYKVTQGLLEEFGERRVIDTPITEHAFAGLGAGAAMGGLRPVVEFMTFNFAMQAMDQIINSAAKTNYMSGGQMRCPIVFRGPNGAASRVAAQHSQNYGPWYAAVPGLIVIAPYDAADCKGLLKAAIRSTDPVVFLENELVYGRSFEVPQIDDYVLPIGKARIVRPGKDVTVVSYSIGVGVALEAAEALAGEGIDAEVIDLRTLRPLDTRTVLDSLAKTNRLVVVEEGWPVCSIASEIAAVCMEQGFDDLDAPVLRVTNEDVPLPYAANLEKAALVDAARVVAAAKKVCYR*