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SCNpilot_expt_1000_bf_scaffold_144_curated_19

Organism: scnpilot_dereplicated_Sphingobium_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(22804..23349)

Top 3 Functional Annotations

Value Algorithm Source
rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase; K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] similarity KEGG
DB: KEGG
  • Identity: 86.7
  • Coverage: 181.0
  • Bit_score: 336
  • Evalue 5.60e-90
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:BAK68093.1}; EC=5.1.3.13 {ECO:0000313|EMBL:BAK68093.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.7
  • Coverage: 181.0
  • Bit_score: 336
  • Evalue 2.50e-89
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IPB2_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 86.7
  • Coverage: 181.0
  • Bit_score: 336
  • Evalue 1.80e-89

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Taxonomy

Sphingobium sp. SYK-6 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 546
ATGAACGTCATCAAGACGGCGATTCCCGGCGTGCTCATTATCGAGCCGAAGCTGTTCGGTGACGAGCGCGGCTTCTTCATGGAAAGCTGGAACGAGCGTATGTTCCGTGAGGCCGGGCTGGATATCGCCTTCGTGCAGGACAATCATAGCCGTTCCGCGCGTGGCGTGCTGCGCGGGCTGCATTATCAGTCGCCCAATCCGCAGGGCAAGCTGGTGCGGGTAACGGCGGGCGCGGTCTTCGATGTGGCGGTGGACATGCGCCGCTCCTCGCCAAGCTTCGGCCAATGGGTAGGCGTGGAGTTGAGCGCGGCTAACAAGCGGATGCTGTGGGTGCCCGAGGGCATGGCGCACGGCTTCCTGTGCCTACAGGACGGCACGGATTTCCTCTACAAATGCCGGGGCTATTACGATCCGGCGAATGAGCACAGCCTGCTGTGGAACGATCCCGCCATCGGCATCGACTGGCCGCTCGACGGGCTGGTGCCGCAGCTTGCCGCCAAGGATGAGGCCGGCCGGCCGCTGGCCGACGCGGTAACGTTCCCGTGA
PROTEIN sequence
Length: 182
MNVIKTAIPGVLIIEPKLFGDERGFFMESWNERMFREAGLDIAFVQDNHSRSARGVLRGLHYQSPNPQGKLVRVTAGAVFDVAVDMRRSSPSFGQWVGVELSAANKRMLWVPEGMAHGFLCLQDGTDFLYKCRGYYDPANEHSLLWNDPAIGIDWPLDGLVPQLAAKDEAGRPLADAVTFP*